Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS13CQ709C8 AC009570.1-201ENST00000609599 745 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 AC090115.4-201ENST00000609970 188 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 AC025034.2-201ENST00000623264 286 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13CQ709C8 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13CQ709C8 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13CQ709C8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13CQ709C8 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS13CQ709C8 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC2.11□□□□□ -2.07
VPS13CQ709C8 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.11□□□□□ -2.07
VPS13CQ709C8 HMGN1P5-201ENST00000448591 263 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 AC090543.2-201ENST00000483963 348 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 TRAV37-201ENST00000553906 342 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 AC009318.2-201ENST00000610917 651 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13CQ709C8 OR10AB1P-202ENST00000641219 1686 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.11□□□□□ -2.07
VPS13CQ709C8 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
VPS13CQ709C8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13CQ709C8 RNU1-89P-201ENST00000384592 164 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 RNU4-26P-201ENST00000410270 107 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC2.11□□□□□ -2.07
VPS13CQ709C8 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.11□□□□□ -2.07
VPS13CQ709C8 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.11□□□□□ -2.07
VPS13CQ709C8 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
VPS13CQ709C8 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS13CQ709C8 AC245166.1-201ENST00000521012 253 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.11□□□□□ -2.07
VPS13CQ709C8 Z82195.1-201ENST00000604558 398 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC2.11□□□□□ -2.07
VPS13CQ709C8 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VPS13CQ709C8 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC2.11□□□□□ -2.07
VPS13CQ709C8 AC080128.1-201ENST00000474389 1917 ntBASIC2.11□□□□□ -2.07
VPS13CQ709C8 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC2.1□□□□□ -2.07
VPS13CQ709C8 RNU4-53P-201ENST00000410828 140 ntBASIC2.1□□□□□ -2.07
VPS13CQ709C8 AC127526.1-201ENST00000417526 366 ntBASIC2.1□□□□□ -2.07
VPS13CQ709C8 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS13CQ709C8 RN7SL442P-201ENST00000473804 320 ntBASIC2.1□□□□□ -2.07
VPS13CQ709C8 SCGB1D5P-201ENST00000515134 247 ntBASIC2.1□□□□□ -2.07
VPS13CQ709C8 HPRT1P3-201ENST00000539521 576 ntBASIC2.1□□□□□ -2.07
VPS13CQ709C8 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS13CQ709C8 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS13CQ709C8 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
VPS13CQ709C8 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13CQ709C8 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13CQ709C8 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
VPS13CQ709C8 CYCSP45-201ENST00000402289 315 ntBASIC2.1□□□□□ -2.07
VPS13CQ709C8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC2.1□□□□□ -2.07
VPS13CQ709C8 AC009414.1-201ENST00000427200 443 ntBASIC2.1□□□□□ -2.07
VPS13CQ709C8 AL513043.1-201ENST00000439124 535 ntBASIC2.1□□□□□ -2.07
VPS13CQ709C8 AC010928.3-201ENST00000587712 541 ntBASIC2.1□□□□□ -2.07
VPS13CQ709C8 AL136981.2-201ENST00000617319 734 ntBASIC2.1□□□□□ -2.07
VPS13CQ709C8 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC2.1□□□□□ -2.07
VPS13CQ709C8 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13CQ709C8 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13CQ709C8 RNA5SP88-201ENST00000365560 109 ntBASIC2.1□□□□□ -2.07
VPS13CQ709C8 AL590639.1-201ENST00000456484 337 ntBASIC2.1□□□□□ -2.07
VPS13CQ709C8 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS13CQ709C8 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13CQ709C8 AC016687.1-201ENST00000482574 353 ntBASIC2.1□□□□□ -2.07
VPS13CQ709C8 AC103858.2-201ENST00000621471 543 ntBASIC2.1□□□□□ -2.07
VPS13CQ709C8 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
VPS13CQ709C8 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC2.1□□□□□ -2.07
VPS13CQ709C8 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.09□□□□□ -2.07
VPS13CQ709C8 AL023284.1-201ENST00000403956 276 ntBASIC2.09□□□□□ -2.07
VPS13CQ709C8 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
VPS13CQ709C8 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS13CQ709C8 AL049610.1-201ENST00000423374 372 ntBASIC2.09□□□□□ -2.07
VPS13CQ709C8 AL356320.1-201ENST00000429616 163 ntBASIC2.09□□□□□ -2.07
VPS13CQ709C8 AL662791.1-201ENST00000441992 928 ntBASIC2.09□□□□□ -2.07
VPS13CQ709C8 AC022884.3-201ENST00000579571 248 ntBASIC2.09□□□□□ -2.07
VPS13CQ709C8 ZNF861P-201ENST00000588126 639 ntBASIC2.09□□□□□ -2.07
VPS13CQ709C8 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC2.09□□□□□ -2.07
VPS13CQ709C8 AC004696.1-201ENST00000614345 607 ntBASIC2.09□□□□□ -2.07
VPS13CQ709C8 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS13CQ709C8 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
VPS13CQ709C8 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VPS13CQ709C8 SNORA70E-201ENST00000384492 135 ntBASIC2.09□□□□□ -2.07
VPS13CQ709C8 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS13CQ709C8 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS13CQ709C8 RPL21P41-201ENST00000459863 264 ntBASIC2.09□□□□□ -2.07
VPS13CQ709C8 RN7SL75P-201ENST00000461926 281 ntBASIC2.09□□□□□ -2.07
VPS13CQ709C8 AL024509.2-201ENST00000493462 493 ntBASIC2.09□□□□□ -2.07
VPS13CQ709C8 AC021146.1-201ENST00000511202 716 ntBASIC2.09□□□□□ -2.07
VPS13CQ709C8 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS13CQ709C8 AC090695.1-201ENST00000561269 1222 ntBASIC2.09□□□□□ -2.07
VPS13CQ709C8 AC079298.2-201ENST00000623885 459 ntBASIC2.09□□□□□ -2.07
VPS13CQ709C8 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
VPS13CQ709C8 RNA5SP456-201ENST00000364002 114 ntBASIC2.09□□□□□ -2.08
VPS13CQ709C8 AL591623.2-201ENST00000449978 222 ntBASIC2.09□□□□□ -2.08
VPS13CQ709C8 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.09□□□□□ -2.08
VPS13CQ709C8 AC015911.5-201ENST00000587076 451 ntBASIC2.09□□□□□ -2.08
VPS13CQ709C8 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.09□□□□□ -2.08
VPS13CQ709C8 AP003117.2-201ENST00000606010 545 ntBASIC2.09□□□□□ -2.08
VPS13CQ709C8 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
VPS13CQ709C8 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
VPS13CQ709C8 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
VPS13CQ709C8 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VPS13CQ709C8 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms