Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AC007560.1-201ENST00000426912 237 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 PSPHP1-201ENST00000450062 261 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 RPL9P6-201ENST00000492764 598 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AC117522.3-201ENST00000507974 584 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 ELOCP23-201ENST00000452014 332 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AC093767.1-201ENST00000504523 156 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 PHACTR2P1-201ENST00000605639 1414 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 GSTM3P2-201ENST00000412746 530 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 MED6P1-201ENST00000439659 713 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AC008568.2-201ENST00000623862 2313 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 NAP1L1P2-201ENST00000414182 1089 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AP1B1P2-201ENST00000416196 106 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 RPL7P10-201ENST00000417407 739 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 RPL30P3-201ENST00000424262 333 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AC073335.1-201ENST00000427776 363 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 NDUFB4P6-201ENST00000436819 366 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AC233279.1-201ENST00000455300 423 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AP000893.1-201ENST00000474462 794 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AC025554.1-201ENST00000505641 188 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 AC021733.2-201ENST00000518830 497 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 RPS3AP4-201ENST00000555161 764 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 SLC25A36P1-201ENST00000590111 465 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 C1orf21-201ENST00000235307 10265 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 CUL1P1-201ENST00000509510 2425 ntBASIC1.62□□□□□ -2.15
UBR4Q5T4S7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
UBR4Q5T4S7 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 RNU6-851P-201ENST00000384565 107 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 VDAC2P1-201ENST00000399358 958 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 RN7SKP123-201ENST00000410732 291 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 IPMKP1-201ENST00000425988 855 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 RPS4XP22-201ENST00000480755 780 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 MORF4L2P1-201ENST00000503761 858 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 AC005921.1-201ENST00000510589 286 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 AC021146.3-201ENST00000511911 260 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 PRELID3BP8-201ENST00000604148 295 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 AC009948.4-201ENST00000604692 675 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 PLCE1P1-201ENST00000622094 305 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 AC004972.1-201ENST00000623934 2209 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 RNA5SP42-201ENST00000364278 115 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 AC244033.1-201ENST00000426826 870 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 HMGB3P22-202ENST00000451823 572 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 IGLVIV-66-1-201ENST00000521832 460 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 AC026979.4-201ENST00000606555 645 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 RNU6-859P-201ENST00000362728 107 ntBASIC1.61□□□□□ -2.15
UBR4Q5T4S7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 LINC02374-201ENST00000503637 743 ntTSL 3 BASIC1.61□□□□□ -2.15
UBR4Q5T4S7 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms