Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 AC011477.5-201ENST00000586571 259 ntBASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 RPL26P30-202ENST00000602923 645 ntBASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 AC109347.2-201ENST00000610220 349 ntBASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 AL589743.7-201ENST00000612637 233 ntBASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 U3.53-201ENST00000628922 216 ntBASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 CRYM-AS1-204ENST00000637983 556 ntBASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 FAM157B-203ENST00000639350 358 ntBASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
PTCHD3Q3KNS1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 OR11H5P-202ENST00000641612 1325 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 LINC01109-201ENST00000603837 3081 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AL022578.1-201ENST00000439330 1433 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 DHX40P1-201ENST00000588725 1412 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AC090971.4-201ENST00000560291 1800 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 OR4K15-201ENST00000305051 1216 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 OR11H4-201ENST00000315409 1082 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 RNU6-777P-201ENST00000364265 104 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AL031679.1-201ENST00000400616 525 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 HMGN1P14-201ENST00000412459 517 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 ISCUP1-201ENST00000454451 448 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 SCARNA10-201ENST00000459255 330 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 OR9M1P-201ENST00000459641 921 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AC104563.1-201ENST00000476147 376 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 RPL7P24-201ENST00000493052 752 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 HMGB1P21-201ENST00000502313 581 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 RPL37P25-201ENST00000507308 276 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AF213884.2-201ENST00000510417 903 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AC007016.1-201ENST00000512110 244 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 KCTD9P2-201ENST00000512203 1013 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 RN7SKP298-201ENST00000515950 94 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 SNORD116-26-201ENST00000516006 96 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 PAICSP4-201ENST00000517543 1253 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AC022790.1-201ENST00000522872 204 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AP002453.2-201ENST00000533503 320 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 MIR5697-201ENST00000578045 78 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AP005119.2-201ENST00000579735 1105 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AC015871.2-201ENST00000603605 948 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 SEPT7P9-203ENST00000604116 343 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 BCRP9-201ENST00000605312 388 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 SNORD91B-202ENST00000608459 222 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AC019193.2-201ENST00000610012 634 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AC092794.1-201ENST00000612734 582 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AL139089.1-201ENST00000620372 975 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 AC005086.4-201ENST00000623065 213 ntBASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
PTCHD3Q3KNS1 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
PTCHD3Q3KNS1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC4.46□□□□□ -1.69
PTCHD3Q3KNS1 AC027514.1-201ENST00000588561 1603 ntBASIC4.46□□□□□ -1.69
PTCHD3Q3KNS1 OR6K3-201ENST00000368145 1844 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
PTCHD3Q3KNS1 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.46□□□□□ -1.69
PTCHD3Q3KNS1 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.46□□□□□ -1.69
PTCHD3Q3KNS1 AC108467.2-201ENST00000617640 1597 ntBASIC4.46□□□□□ -1.7
PTCHD3Q3KNS1 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.46□□□□□ -1.7
PTCHD3Q3KNS1 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PTCHD3Q3KNS1 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PTCHD3Q3KNS1 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PTCHD3Q3KNS1 RNU6-517P-201ENST00000384362 110 ntBASIC4.46□□□□□ -1.7
PTCHD3Q3KNS1 RNU6-769P-201ENST00000384407 104 ntBASIC4.46□□□□□ -1.7
PTCHD3Q3KNS1 FCF1P9-201ENST00000412546 282 ntBASIC4.46□□□□□ -1.7
PTCHD3Q3KNS1 AL513174.1-201ENST00000423182 629 ntBASIC4.46□□□□□ -1.7
PTCHD3Q3KNS1 AL356583.2-201ENST00000426536 280 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms