Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SNORA31.26-201ENST00000517250 137 ntBASIC3.37□□□□□ -1.87
TPM4P67936 ZNF415P1-201ENST00000582279 1166 ntBASIC3.37□□□□□ -1.87
TPM4P67936 AC007448.1-201ENST00000582714 234 ntBASIC3.37□□□□□ -1.87
TPM4P67936 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.37□□□□□ -1.87
TPM4P67936 AC006504.3-201ENST00000586818 523 ntBASIC3.37□□□□□ -1.87
TPM4P67936 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC3.37□□□□□ -1.87
TPM4P67936 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.37□□□□□ -1.87
TPM4P67936 AL133393.1-201ENST00000603277 287 ntBASIC3.37□□□□□ -1.87
TPM4P67936 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.37□□□□□ -1.87
TPM4P67936 AC105227.2-201ENST00000615075 605 ntBASIC3.37□□□□□ -1.87
TPM4P67936 AC138932.5-201ENST00000617759 563 ntBASIC3.37□□□□□ -1.87
TPM4P67936 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.37□□□□□ -1.87
TPM4P67936 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
TPM4P67936 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
TPM4P67936 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.37□□□□□ -1.87
TPM4P67936 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
TPM4P67936 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TPM4P67936 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.36□□□□□ -1.87
TPM4P67936 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
TPM4P67936 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TPM4P67936 MTATP6P31-201ENST00000406985 692 ntBASIC3.36□□□□□ -1.87
TPM4P67936 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.36□□□□□ -1.87
TPM4P67936 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TPM4P67936 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.36□□□□□ -1.87
TPM4P67936 TRAPPC13P1-201ENST00000435991 1062 ntBASIC3.36□□□□□ -1.87
TPM4P67936 HMGB1P5-202ENST00000451497 985 ntBASIC3.36□□□□□ -1.87
TPM4P67936 RPL21P41-201ENST00000459863 264 ntBASIC3.36□□□□□ -1.87
TPM4P67936 AC104689.1-201ENST00000473356 768 ntBASIC3.36□□□□□ -1.87
TPM4P67936 RPS29P2-201ENST00000479278 136 ntBASIC3.36□□□□□ -1.87
TPM4P67936 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.36□□□□□ -1.87
TPM4P67936 GMPSP1-201ENST00000514075 579 ntBASIC3.36□□□□□ -1.87
TPM4P67936 MTCO2P32-201ENST00000514865 403 ntBASIC3.36□□□□□ -1.87
TPM4P67936 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.36□□□□□ -1.87
TPM4P67936 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.36□□□□□ -1.87
TPM4P67936 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.36□□□□□ -1.87
TPM4P67936 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.36□□□□□ -1.87
TPM4P67936 POLR2KP1-201ENST00000553226 168 ntBASIC3.36□□□□□ -1.87
TPM4P67936 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.36□□□□□ -1.87
TPM4P67936 MIR3160-1-201ENST00000577972 85 ntBASIC3.36□□□□□ -1.87
TPM4P67936 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.36□□□□□ -1.87
TPM4P67936 CCDC58P3-201ENST00000590792 430 ntBASIC3.36□□□□□ -1.87
TPM4P67936 AC023043.3-201ENST00000593113 385 ntBASIC3.36□□□□□ -1.87
TPM4P67936 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.36□□□□□ -1.87
TPM4P67936 CKS1BP3-201ENST00000600888 237 ntBASIC3.36□□□□□ -1.87
TPM4P67936 YWHAQP7-201ENST00000603536 658 ntBASIC3.36□□□□□ -1.87
TPM4P67936 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.36□□□□□ -1.87
TPM4P67936 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.36□□□□□ -1.87
TPM4P67936 MIR622-201ENST00000638396 96 ntBASIC3.36□□□□□ -1.87
TPM4P67936 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TPM4P67936 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.36□□□□□ -1.87
TPM4P67936 AC110774.1-201ENST00000623567 2018 ntBASIC3.36□□□□□ -1.87
TPM4P67936 RN7SKP202-201ENST00000410439 330 ntBASIC3.35□□□□□ -1.87
TPM4P67936 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.35□□□□□ -1.87
TPM4P67936 MTCYBP24-201ENST00000420387 1106 ntBASIC3.35□□□□□ -1.87
TPM4P67936 SAR1AP4-201ENST00000429225 591 ntBASIC3.35□□□□□ -1.87
TPM4P67936 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.35□□□□□ -1.87
TPM4P67936 AC016696.1-201ENST00000446949 318 ntBASIC3.35□□□□□ -1.87
TPM4P67936 RPS27AP9-201ENST00000477681 438 ntBASIC3.35□□□□□ -1.87
TPM4P67936 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.35□□□□□ -1.87
TPM4P67936 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.35□□□□□ -1.87
TPM4P67936 AC016065.2-201ENST00000514530 444 ntBASIC3.35□□□□□ -1.87
TPM4P67936 AC026403.1-201ENST00000518938 295 ntBASIC3.35□□□□□ -1.87
TPM4P67936 TRMT10BP1-201ENST00000519377 943 ntBASIC3.35□□□□□ -1.87
TPM4P67936 AC008562.1-201ENST00000521763 330 ntBASIC3.35□□□□□ -1.87
TPM4P67936 AC104115.2-201ENST00000523026 687 ntBASIC3.35□□□□□ -1.87
TPM4P67936 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.35□□□□□ -1.87
TPM4P67936 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
TPM4P67936 RPL21P12-201ENST00000559810 515 ntBASIC3.35□□□□□ -1.87
TPM4P67936 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.35□□□□□ -1.87
TPM4P67936 AC010653.1-201ENST00000571108 881 ntBASIC3.35□□□□□ -1.87
TPM4P67936 AL359198.2-201ENST00000611836 194 ntBASIC3.35□□□□□ -1.87
TPM4P67936 AL020991.1-201ENST00000612314 373 ntBASIC3.35□□□□□ -1.87
TPM4P67936 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.35□□□□□ -1.87
TPM4P67936 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
TPM4P67936 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TPM4P67936 RPL9P7-201ENST00000330965 580 ntBASIC3.34□□□□□ -1.87
TPM4P67936 SNORD67-201ENST00000390833 111 ntBASIC3.34□□□□□ -1.87
TPM4P67936 AL357075.1-201ENST00000404107 726 ntBASIC3.34□□□□□ -1.87
TPM4P67936 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.34□□□□□ -1.87
TPM4P67936 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.34□□□□□ -1.87
TPM4P67936 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM4P67936 HSPE1P28-201ENST00000443139 211 ntBASIC3.34□□□□□ -1.87
TPM4P67936 ELOCP13-201ENST00000443934 329 ntBASIC3.34□□□□□ -1.87
TPM4P67936 HMGN2P13-201ENST00000476476 274 ntBASIC3.34□□□□□ -1.87
TPM4P67936 AC006483.1-201ENST00000487308 313 ntBASIC3.34□□□□□ -1.87
TPM4P67936 PRELID3BP6-201ENST00000503839 571 ntBASIC3.34□□□□□ -1.87
TPM4P67936 HMGB1P22-201ENST00000505315 124 ntBASIC3.34□□□□□ -1.87
TPM4P67936 AC016550.3-201ENST00000515706 767 ntBASIC3.34□□□□□ -1.87
TPM4P67936 RN7SKP282-201ENST00000516824 299 ntBASIC3.34□□□□□ -1.87
TPM4P67936 AC104986.1-201ENST00000517978 436 ntBASIC3.34□□□□□ -1.87
TPM4P67936 COX6B1P6-201ENST00000522347 255 ntBASIC3.34□□□□□ -1.87
TPM4P67936 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.34□□□□□ -1.87
TPM4P67936 AC109635.4-202ENST00000531666 412 ntBASIC3.34□□□□□ -1.87
TPM4P67936 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM4P67936 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TPM4P67936 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM4P67936 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM4P67936 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.34□□□□□ -1.87
TPM4P67936 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.34□□□□□ -1.87
TPM4P67936 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms