Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA1P56159 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC4.92□□□□□ -1.62
GFRA1P56159 AP005403.1-201ENST00000579720 229 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 AP001029.3-201ENST00000588063 596 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.92□□□□□ -1.62
GFRA1P56159 AC067852.4-201ENST00000590314 478 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 AL031176.1-201ENST00000604554 466 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 AL132765.2-201ENST00000610812 351 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA1P56159 AC009248.2-201ENST00000619826 254 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.92□□□□□ -1.62
GFRA1P56159 AC090574.1-201ENST00000623186 233 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 AC090617.10-201ENST00000624308 134 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.92□□□□□ -1.62
GFRA1P56159 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.92□□□□□ -1.62
GFRA1P56159 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
GFRA1P56159 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
GFRA1P56159 AC004656.1-201ENST00000568479 4951 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
GFRA1P56159 ZNF33CP-201ENST00000432492 2030 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 ASNSP3-201ENST00000451989 1306 ntBASIC4.92□□□□□ -1.62
GFRA1P56159 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.92□□□□□ -1.62
GFRA1P56159 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.92□□□□□ -1.62
GFRA1P56159 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.91□□□□□ -1.62
GFRA1P56159 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC4.91□□□□□ -1.62
GFRA1P56159 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
GFRA1P56159 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA1P56159 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA1P56159 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA1P56159 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA1P56159 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA1P56159 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA1P56159 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
GFRA1P56159 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA1P56159 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
GFRA1P56159 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA1P56159 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
GFRA1P56159 AC019155.1-201ENST00000382242 574 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 SNORA32.2-201ENST00000384049 122 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 snosnR66.1-201ENST00000391095 99 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 RNU11-4P-201ENST00000391149 133 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 AL356057.2-201ENST00000403318 432 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.91□□□□□ -1.62
GFRA1P56159 RNU2-47P-201ENST00000410649 186 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.91□□□□□ -1.62
GFRA1P56159 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.91□□□□□ -1.62
GFRA1P56159 AL355433.1-201ENST00000422804 300 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 RPL23AP38-201ENST00000423801 469 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 RPL7L1P9-201ENST00000431298 745 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 RPL34P6-201ENST00000432390 345 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 ELOCP18-201ENST00000434209 337 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 AC016696.1-201ENST00000446949 318 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 RPL7P19-201ENST00000469948 618 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.91□□□□□ -1.62
GFRA1P56159 RN7SL214P-201ENST00000487317 265 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.91□□□□□ -1.62
GFRA1P56159 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.91□□□□□ -1.62
GFRA1P56159 RN7SKP116-201ENST00000516902 319 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 BTF3P12-201ENST00000519620 469 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.91□□□□□ -1.62
GFRA1P56159 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.91□□□□□ -1.62
GFRA1P56159 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.91□□□□□ -1.62
GFRA1P56159 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA1P56159 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.91□□□□□ -1.62
GFRA1P56159 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.91□□□□□ -1.62
GFRA1P56159 CR383656.7-201ENST00000548164 174 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 AC011611.1-201ENST00000552179 197 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 AC078814.3-201ENST00000553036 491 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 AC005668.1-201ENST00000571142 476 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC4.91□□□□□ -1.62
GFRA1P56159 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.91□□□□□ -1.62
GFRA1P56159 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.91□□□□□ -1.62
GFRA1P56159 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
GFRA1P56159 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.91□□□□□ -1.62
GFRA1P56159 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.91□□□□□ -1.62
GFRA1P56159 AL008729.2-201ENST00000606393 473 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 AC064836.2-201ENST00000609491 462 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 AL603758.1-201ENST00000618654 241 ntBASIC4.91□□□□□ -1.62
GFRA1P56159 VPS8-228ENST00000628962 207 ntTSL 5 BASIC4.91□□□□□ -1.62
GFRA1P56159 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
GFRA1P56159 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA1P56159 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.91□□□□□ -1.62
GFRA1P56159 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
GFRA1P56159 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC4.91□□□□□ -1.62
GFRA1P56159 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
GFRA1P56159 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA1P56159 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA1P56159 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.91□□□□□ -1.62
GFRA1P56159 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
GFRA1P56159 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
GFRA1P56159 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.9□□□□□ -1.62
GFRA1P56159 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
GFRA1P56159 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.9□□□□□ -1.62
GFRA1P56159 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.9□□□□□ -1.62
GFRA1P56159 AC005294.1-201ENST00000355509 281 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
GFRA1P56159 RNU6-989P-201ENST00000362756 107 ntBASIC4.9□□□□□ -1.63
GFRA1P56159 SNORA62.1-201ENST00000364287 154 ntBASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms