Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 AL162233.1-201ENST00000620014 944 ntBASIC2.8□□□□□ -1.96
BRCA2P51587 KPNA2P2-201ENST00000419546 1489 ntBASIC2.8□□□□□ -1.96
BRCA2P51587 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
BRCA2P51587 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
BRCA2P51587 SNORD62.1-201ENST00000362541 86 ntBASIC2.8□□□□□ -1.96
BRCA2P51587 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.8□□□□□ -1.96
BRCA2P51587 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
BRCA2P51587 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
BRCA2P51587 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
BRCA2P51587 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
BRCA2P51587 RNU6-14P-201ENST00000384630 106 ntBASIC2.8□□□□□ -1.96
BRCA2P51587 AL160275.2-201ENST00000412010 394 ntBASIC2.8□□□□□ -1.96
BRCA2P51587 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC2.8□□□□□ -1.96
BRCA2P51587 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
BRCA2P51587 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.8□□□□□ -1.96
BRCA2P51587 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
BRCA2P51587 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
BRCA2P51587 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.79□□□□□ -1.96
BRCA2P51587 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.79□□□□□ -1.96
BRCA2P51587 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
BRCA2P51587 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
BRCA2P51587 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC2.79□□□□□ -1.96
BRCA2P51587 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.79□□□□□ -1.96
BRCA2P51587 NDUFA5P6-201ENST00000542110 379 ntBASIC2.79□□□□□ -1.96
BRCA2P51587 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.79□□□□□ -1.96
BRCA2P51587 ZNF861P-201ENST00000588126 639 ntBASIC2.79□□□□□ -1.96
BRCA2P51587 HMGB1P50-201ENST00000605814 607 ntBASIC2.79□□□□□ -1.96
BRCA2P51587 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC2.79□□□□□ -1.96
BRCA2P51587 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
BRCA2P51587 AL359715.4-201ENST00000606629 1436 ntBASIC2.79□□□□□ -1.96
BRCA2P51587 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
BRCA2P51587 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC2.79□□□□□ -1.96
BRCA2P51587 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
BRCA2P51587 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.78□□□□□ -1.96
BRCA2P51587 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
BRCA2P51587 AC107222.1-201ENST00000510899 637 ntBASIC2.78□□□□□ -1.96
BRCA2P51587 RNA5SP480-201ENST00000516840 109 ntBASIC2.78□□□□□ -1.96
BRCA2P51587 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC2.78□□□□□ -1.96
BRCA2P51587 MIR4635-201ENST00000583759 79 ntBASIC2.78□□□□□ -1.96
BRCA2P51587 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.78□□□□□ -1.96
BRCA2P51587 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.78□□□□□ -1.96
BRCA2P51587 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
BRCA2P51587 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
BRCA2P51587 NEAT1-202ENST00000501122 22743 ntBASIC2.78□□□□□ -1.96
BRCA2P51587 AC091564.4-201ENST00000533934 2194 ntBASIC2.78□□□□□ -1.96
BRCA2P51587 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
BRCA2P51587 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
BRCA2P51587 RPL32P35-201ENST00000415214 394 ntBASIC2.78□□□□□ -1.96
BRCA2P51587 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.78□□□□□ -1.96
BRCA2P51587 AL353729.1-201ENST00000425044 720 ntBASIC2.78□□□□□ -1.96
BRCA2P51587 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.78□□□□□ -1.96
BRCA2P51587 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.78□□□□□ -1.96
BRCA2P51587 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.78□□□□□ -1.96
BRCA2P51587 CR381653.2-201ENST00000624041 768 ntBASIC2.78□□□□□ -1.96
BRCA2P51587 AC022031.1-201ENST00000585985 2593 ntBASIC2.78□□□□□ -1.96
BRCA2P51587 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
BRCA2P51587 AL359893.1-201ENST00000447628 1580 ntBASIC2.78□□□□□ -1.96
BRCA2P51587 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC2.78□□□□□ -1.96
BRCA2P51587 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
BRCA2P51587 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
BRCA2P51587 RNU6-321P-201ENST00000410912 106 ntBASIC2.78□□□□□ -1.96
BRCA2P51587 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
BRCA2P51587 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.78□□□□□ -1.96
BRCA2P51587 HPRT1P3-201ENST00000539521 576 ntBASIC2.78□□□□□ -1.96
BRCA2P51587 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
BRCA2P51587 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
BRCA2P51587 NPM1P10-201ENST00000398310 865 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.77□□□□□ -1.97
BRCA2P51587 HMGB1P16-201ENST00000447155 540 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 AC022795.1-201ENST00000473808 480 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 AC104237.2-201ENST00000612456 443 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 AC009237.17-201ENST00000618111 748 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC2.77□□□□□ -1.97
BRCA2P51587 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
BRCA2P51587 RPL5P16-201ENST00000471467 790 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 AP001086.1-201ENST00000494882 321 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.77□□□□□ -1.97
BRCA2P51587 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
BRCA2P51587 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC2.77□□□□□ -1.97
BRCA2P51587 RN7SKP44-201ENST00000363602 316 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 RNU2-2P-201ENST00000410396 191 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC2.77□□□□□ -1.97
BRCA2P51587 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
BRCA2P51587 AP005136.1-201ENST00000579765 429 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 AC103710.2-201ENST00000609912 942 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 U2.15-201ENST00000611544 191 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 U2.16-201ENST00000613119 191 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 U2.12-201ENST00000613778 191 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 U2.20-201ENST00000613956 192 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 U2.9-201ENST00000615427 191 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 U2.11-201ENST00000616345 191 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 U2.2-201ENST00000616535 191 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 U2.3-201ENST00000617785 191 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 U2.19-201ENST00000618602 191 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 RNU2-1-201ENST00000618664 191 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 U2.6-201ENST00000619225 191 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 U2.5-201ENST00000619465 191 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 U2.10-201ENST00000620268 191 ntBASIC2.77□□□□□ -1.97
BRCA2P51587 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms