Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.93□□□□□ -1.78
LHX1P48742 RNU6-311P-201ENST00000516224 102 ntBASIC3.93□□□□□ -1.78
LHX1P48742 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC3.93□□□□□ -1.78
LHX1P48742 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.93□□□□□ -1.78
LHX1P48742 AP000790.1-201ENST00000528891 737 ntBASIC3.93□□□□□ -1.78
LHX1P48742 MTND1P24-201ENST00000552175 861 ntBASIC3.93□□□□□ -1.78
LHX1P48742 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC3.93□□□□□ -1.78
LHX1P48742 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.93□□□□□ -1.78
LHX1P48742 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.93□□□□□ -1.78
LHX1P48742 MIR4444-1-201ENST00000581696 74 ntBASIC3.93□□□□□ -1.78
LHX1P48742 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.93□□□□□ -1.78
LHX1P48742 MIR4444-2-201ENST00000584390 74 ntBASIC3.93□□□□□ -1.78
LHX1P48742 CCDC58P3-201ENST00000590792 430 ntBASIC3.93□□□□□ -1.78
LHX1P48742 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.93□□□□□ -1.78
LHX1P48742 AC244505.7-201ENST00000599675 272 ntBASIC3.93□□□□□ -1.78
LHX1P48742 YWHAQP7-201ENST00000603536 658 ntBASIC3.93□□□□□ -1.78
LHX1P48742 AC007566.2-201ENST00000603642 413 ntBASIC3.93□□□□□ -1.78
LHX1P48742 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.93□□□□□ -1.78
LHX1P48742 AC092954.1-201ENST00000609121 445 ntBASIC3.93□□□□□ -1.78
LHX1P48742 AC022509.4-201ENST00000621404 572 ntBASIC3.93□□□□□ -1.78
LHX1P48742 AC091905.1-201ENST00000624400 311 ntBASIC3.93□□□□□ -1.78
LHX1P48742 OR8B1P-202ENST00000641132 1178 ntBASIC3.93□□□□□ -1.78
LHX1P48742 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LHX1P48742 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.93□□□□□ -1.78
LHX1P48742 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.93□□□□□ -1.78
LHX1P48742 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
LHX1P48742 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.93□□□□□ -1.78
LHX1P48742 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
LHX1P48742 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.92□□□□□ -1.78
LHX1P48742 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LHX1P48742 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LHX1P48742 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.92□□□□□ -1.78
LHX1P48742 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
LHX1P48742 RNU6-1279P-201ENST00000383917 103 ntBASIC3.92□□□□□ -1.78
LHX1P48742 MIR449B-201ENST00000384995 97 ntBASIC3.92□□□□□ -1.78
LHX1P48742 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
LHX1P48742 ERHP2-201ENST00000402323 299 ntBASIC3.92□□□□□ -1.78
LHX1P48742 MTND4P22-201ENST00000413116 1169 ntBASIC3.92□□□□□ -1.78
LHX1P48742 AC245054.1-201ENST00000420944 258 ntBASIC3.92□□□□□ -1.78
LHX1P48742 MTCO2P17-201ENST00000424336 677 ntBASIC3.92□□□□□ -1.78
LHX1P48742 BMS1P19-201ENST00000433925 393 ntBASIC3.92□□□□□ -1.78
LHX1P48742 AL451050.1-201ENST00000450126 415 ntBASIC3.92□□□□□ -1.78
LHX1P48742 AC099563.1-201ENST00000456086 418 ntBASIC3.92□□□□□ -1.78
LHX1P48742 SNORD105B-201ENST00000458770 79 ntBASIC3.92□□□□□ -1.78
LHX1P48742 AC011979.1-201ENST00000472300 483 ntBASIC3.92□□□□□ -1.78
LHX1P48742 AC010301.1-201ENST00000473936 355 ntBASIC3.92□□□□□ -1.78
LHX1P48742 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.92□□□□□ -1.78
LHX1P48742 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.92□□□□□ -1.78
LHX1P48742 AC114322.1-201ENST00000506771 926 ntBASIC3.92□□□□□ -1.78
LHX1P48742 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.92□□□□□ -1.78
LHX1P48742 MTCYBP16-201ENST00000509187 1129 ntBASIC3.92□□□□□ -1.78
LHX1P48742 RANP9-201ENST00000519957 271 ntBASIC3.92□□□□□ -1.78
LHX1P48742 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.92□□□□□ -1.78
LHX1P48742 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.92□□□□□ -1.78
LHX1P48742 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.92□□□□□ -1.78
LHX1P48742 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.92□□□□□ -1.78
LHX1P48742 LSM6P2-201ENST00000552208 177 ntBASIC3.92□□□□□ -1.78
LHX1P48742 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.92□□□□□ -1.78
LHX1P48742 CENPUP2-201ENST00000555897 1186 ntBASIC3.92□□□□□ -1.78
LHX1P48742 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC3.92□□□□□ -1.78
LHX1P48742 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LHX1P48742 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.92□□□□□ -1.78
LHX1P48742 AP001269.3-201ENST00000588718 329 ntBASIC3.92□□□□□ -1.78
LHX1P48742 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.92□□□□□ -1.78
LHX1P48742 AC020914.6-201ENST00000594327 272 ntBASIC3.92□□□□□ -1.78
LHX1P48742 AC010680.3-201ENST00000604215 520 ntBASIC3.92□□□□□ -1.78
LHX1P48742 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC3.92□□□□□ -1.78
LHX1P48742 AC023158.2-201ENST00000614876 543 ntBASIC3.92□□□□□ -1.78
LHX1P48742 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.92□□□□□ -1.78
LHX1P48742 MIR4727-201ENST00000622232 55 ntBASIC3.92□□□□□ -1.78
LHX1P48742 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
LHX1P48742 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LHX1P48742 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
LHX1P48742 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
LHX1P48742 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LHX1P48742 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LHX1P48742 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LHX1P48742 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LHX1P48742 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LHX1P48742 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.91□□□□□ -1.78
LHX1P48742 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.91□□□□□ -1.78
LHX1P48742 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 RNU4-92P-201ENST00000363783 136 ntBASIC3.91□□□□□ -1.78
LHX1P48742 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
LHX1P48742 RNU2-42P-201ENST00000410697 113 ntBASIC3.91□□□□□ -1.78
LHX1P48742 RNA5SP39-201ENST00000411245 120 ntBASIC3.91□□□□□ -1.78
LHX1P48742 AL161449.1-201ENST00000414531 1199 ntBASIC3.91□□□□□ -1.78
LHX1P48742 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.91□□□□□ -1.78
LHX1P48742 RPL31P45-201ENST00000419532 356 ntBASIC3.91□□□□□ -1.78
LHX1P48742 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 AL391219.1-201ENST00000422570 483 ntBASIC3.91□□□□□ -1.78
LHX1P48742 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LHX1P48742 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.91□□□□□ -1.78
LHX1P48742 RPL7P44-201ENST00000424827 742 ntBASIC3.91□□□□□ -1.78
LHX1P48742 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.91□□□□□ -1.78
LHX1P48742 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.91□□□□□ -1.78
LHX1P48742 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC3.91□□□□□ -1.78
LHX1P48742 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 184.5 ms