Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 COL6A4P2-205ENST00000509855 506 ntBASIC3.36□□□□□ -1.87
RORAP35398 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.36□□□□□ -1.87
RORAP35398 AC087272.1-201ENST00000523624 533 ntBASIC3.36□□□□□ -1.87
RORAP35398 AC008489.1-201ENST00000524271 483 ntBASIC3.36□□□□□ -1.87
RORAP35398 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.36□□□□□ -1.87
RORAP35398 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
RORAP35398 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.36□□□□□ -1.87
RORAP35398 OSBPL9P3-201ENST00000534523 595 ntBASIC3.36□□□□□ -1.87
RORAP35398 AL163153.1-201ENST00000554223 283 ntBASIC3.36□□□□□ -1.87
RORAP35398 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.36□□□□□ -1.87
RORAP35398 AC007566.2-201ENST00000603642 413 ntBASIC3.36□□□□□ -1.87
RORAP35398 AL355365.1-201ENST00000616480 294 ntBASIC3.36□□□□□ -1.87
RORAP35398 AC018926.3-201ENST00000618841 406 ntBASIC3.36□□□□□ -1.87
RORAP35398 AC018816.2-201ENST00000621460 353 ntBASIC3.36□□□□□ -1.87
RORAP35398 AF117829.1-206ENST00000621883 3802 ntBASIC3.36□□□□□ -1.87
RORAP35398 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.36□□□□□ -1.87
RORAP35398 AL590396.2-201ENST00000636511 1041 ntBASIC3.36□□□□□ -1.87
RORAP35398 AC017104.5-201ENST00000637647 639 ntBASIC3.36□□□□□ -1.87
RORAP35398 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.36□□□□□ -1.87
RORAP35398 AC005183.1-201ENST00000603687 1979 ntBASIC3.36□□□□□ -1.87
RORAP35398 MTND5P1-201ENST00000445440 1375 ntBASIC3.36□□□□□ -1.87
RORAP35398 MTND4P8-201ENST00000514997 1362 ntBASIC3.36□□□□□ -1.87
RORAP35398 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.36□□□□□ -1.87
RORAP35398 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
RORAP35398 MFSD8-233ENST00000641482 4860 ntBASIC3.36□□□□□ -1.87
RORAP35398 AC073346.2-201ENST00000624724 2058 ntBASIC3.35□□□□□ -1.87
RORAP35398 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RORAP35398 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
RORAP35398 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RORAP35398 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RORAP35398 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.35□□□□□ -1.87
RORAP35398 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.35□□□□□ -1.87
RORAP35398 AC024341.1-201ENST00000526444 1552 ntBASIC3.35□□□□□ -1.87
RORAP35398 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RORAP35398 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RORAP35398 RNU6-1339P-201ENST00000363574 91 ntBASIC3.35□□□□□ -1.87
RORAP35398 SNORD56.4-201ENST00000363883 71 ntBASIC3.35□□□□□ -1.87
RORAP35398 OR6K3-202ENST00000368146 996 ntBASIC3.35□□□□□ -1.87
RORAP35398 AL158156.1-201ENST00000422509 473 ntBASIC3.35□□□□□ -1.87
RORAP35398 AC002075.2-201ENST00000425207 252 ntBASIC3.35□□□□□ -1.87
RORAP35398 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.35□□□□□ -1.87
RORAP35398 UBE2V1P5-201ENST00000440070 405 ntBASIC3.35□□□□□ -1.87
RORAP35398 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RORAP35398 RPL7P52-201ENST00000449200 742 ntBASIC3.35□□□□□ -1.87
RORAP35398 AC023598.1-201ENST00000472521 361 ntBASIC3.35□□□□□ -1.87
RORAP35398 CYCSP20-201ENST00000473154 315 ntBASIC3.35□□□□□ -1.87
RORAP35398 RPS27AP1-201ENST00000475545 471 ntBASIC3.35□□□□□ -1.87
RORAP35398 AC012181.1-201ENST00000479895 423 ntBASIC3.35□□□□□ -1.87
RORAP35398 SETP14-201ENST00000497538 873 ntBASIC3.35□□□□□ -1.87
RORAP35398 HSPD1P15-201ENST00000505573 1122 ntBASIC3.35□□□□□ -1.87
RORAP35398 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.35□□□□□ -1.87
RORAP35398 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.35□□□□□ -1.87
RORAP35398 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.35□□□□□ -1.87
RORAP35398 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.35□□□□□ -1.87
RORAP35398 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.35□□□□□ -1.87
RORAP35398 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.35□□□□□ -1.87
RORAP35398 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.35□□□□□ -1.87
RORAP35398 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.35□□□□□ -1.87
RORAP35398 CYP2C60P-201ENST00000566088 139 ntBASIC3.35□□□□□ -1.87
RORAP35398 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.35□□□□□ -1.87
RORAP35398 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.35□□□□□ -1.87
RORAP35398 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RORAP35398 AL031985.2-201ENST00000600955 480 ntBASIC3.35□□□□□ -1.87
RORAP35398 RMST_10.1-201ENST00000616309 154 ntBASIC3.35□□□□□ -1.87
RORAP35398 AC073569.3-201ENST00000619055 682 ntBASIC3.35□□□□□ -1.87
RORAP35398 AP003400.6-201ENST00000624698 740 ntBASIC3.35□□□□□ -1.87
RORAP35398 AC092608.3-201ENST00000625017 386 ntBASIC3.35□□□□□ -1.87
RORAP35398 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.35□□□□□ -1.87
RORAP35398 OR6C71P-202ENST00000641886 1107 ntBASIC3.35□□□□□ -1.87
RORAP35398 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
RORAP35398 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
RORAP35398 AL672296.1-201ENST00000427780 2158 ntBASIC3.35□□□□□ -1.87
RORAP35398 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC3.35□□□□□ -1.87
RORAP35398 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
RORAP35398 AC116096.1-201ENST00000566804 2314 ntBASIC3.35□□□□□ -1.87
RORAP35398 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
RORAP35398 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
RORAP35398 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.34□□□□□ -1.87
RORAP35398 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RORAP35398 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
RORAP35398 RNU4-35P-201ENST00000362588 141 ntBASIC3.34□□□□□ -1.87
RORAP35398 RNA5SP42-201ENST00000364278 115 ntBASIC3.34□□□□□ -1.87
RORAP35398 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
RORAP35398 SNORA51.12-201ENST00000384448 134 ntBASIC3.34□□□□□ -1.87
RORAP35398 SNORD17-201ENST00000390930 237 ntBASIC3.34□□□□□ -1.87
RORAP35398 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.34□□□□□ -1.87
RORAP35398 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.34□□□□□ -1.87
RORAP35398 RN7SKP53-201ENST00000411337 315 ntBASIC3.34□□□□□ -1.87
RORAP35398 BX842559.1-201ENST00000419615 532 ntBASIC3.34□□□□□ -1.87
RORAP35398 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.34□□□□□ -1.87
RORAP35398 RPS3AP12-201ENST00000443616 753 ntBASIC3.34□□□□□ -1.87
RORAP35398 ELOCP13-201ENST00000443934 329 ntBASIC3.34□□□□□ -1.87
RORAP35398 AC233982.1-201ENST00000451247 436 ntBASIC3.34□□□□□ -1.87
RORAP35398 DNAJC19P8-201ENST00000452887 259 ntBASIC3.34□□□□□ -1.87
RORAP35398 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.34□□□□□ -1.87
RORAP35398 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.34□□□□□ -1.87
RORAP35398 RPS4XP10-201ENST00000465034 731 ntBASIC3.34□□□□□ -1.87
RORAP35398 MTCO3P35-201ENST00000485582 781 ntBASIC3.34□□□□□ -1.87
RORAP35398 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
RORAP35398 AC008885.2-201ENST00000509506 930 ntBASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 131.6 ms