Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
TOP2AP11388 AL590290.1-201ENST00000405336 380 ntBASIC4.45□□□□□ -1.7
TOP2AP11388 RPS27P29-201ENST00000463110 252 ntBASIC4.45□□□□□ -1.7
TOP2AP11388 AC008565.1-201ENST00000509046 885 ntBASIC4.45□□□□□ -1.7
TOP2AP11388 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.45□□□□□ -1.7
TOP2AP11388 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.45□□□□□ -1.7
TOP2AP11388 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC4.45□□□□□ -1.7
TOP2AP11388 AC010928.3-201ENST00000587712 541 ntBASIC4.45□□□□□ -1.7
TOP2AP11388 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.45□□□□□ -1.7
TOP2AP11388 AC007423.1-201ENST00000605009 627 ntBASIC4.45□□□□□ -1.7
TOP2AP11388 CRYM-AS1-204ENST00000637983 556 ntBASIC4.45□□□□□ -1.7
TOP2AP11388 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
TOP2AP11388 AL355379.1-201ENST00000405542 640 ntBASIC4.44□□□□□ -1.7
TOP2AP11388 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.44□□□□□ -1.7
TOP2AP11388 MTCO1P39-201ENST00000426148 480 ntBASIC4.44□□□□□ -1.7
TOP2AP11388 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.44□□□□□ -1.7
TOP2AP11388 KCTD9P5-201ENST00000504141 1170 ntBASIC4.44□□□□□ -1.7
TOP2AP11388 AC108471.1-201ENST00000513977 287 ntBASIC4.44□□□□□ -1.7
TOP2AP11388 AP000857.1-201ENST00000532151 543 ntBASIC4.44□□□□□ -1.7
TOP2AP11388 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.44□□□□□ -1.7
TOP2AP11388 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC4.44□□□□□ -1.7
TOP2AP11388 MIR4524B-201ENST00000581569 115 ntBASIC4.44□□□□□ -1.7
TOP2AP11388 AL158827.2-201ENST00000602494 330 ntBASIC4.44□□□□□ -1.7
TOP2AP11388 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC4.44□□□□□ -1.7
TOP2AP11388 AL691447.3-201ENST00000635020 330 ntBASIC4.44□□□□□ -1.7
TOP2AP11388 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
TOP2AP11388 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TOP2AP11388 MIR504-201ENST00000385065 83 ntBASIC4.43□□□□□ -1.7
TOP2AP11388 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.43□□□□□ -1.7
TOP2AP11388 Z98742.3-201ENST00000418637 326 ntBASIC4.43□□□□□ -1.7
TOP2AP11388 HMGN1P5-201ENST00000448591 263 ntBASIC4.43□□□□□ -1.7
TOP2AP11388 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.43□□□□□ -1.7
TOP2AP11388 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC4.43□□□□□ -1.7
TOP2AP11388 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.43□□□□□ -1.7
TOP2AP11388 AP000873.5-201ENST00000533906 236 ntBASIC4.43□□□□□ -1.7
TOP2AP11388 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC4.43□□□□□ -1.7
TOP2AP11388 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.43□□□□□ -1.7
TOP2AP11388 OR4G1P-202ENST00000641173 1788 ntBASIC4.43□□□□□ -1.7
TOP2AP11388 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TOP2AP11388 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
TOP2AP11388 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TOP2AP11388 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TOP2AP11388 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC4.42□□□□□ -1.7
TOP2AP11388 AL135786.1-201ENST00000415892 214 ntBASIC4.42□□□□□ -1.7
TOP2AP11388 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.42□□□□□ -1.7
TOP2AP11388 AL442163.2-201ENST00000553912 710 ntBASIC4.42□□□□□ -1.7
TOP2AP11388 AC007938.3-201ENST00000604965 623 ntBASIC4.42□□□□□ -1.7
TOP2AP11388 SNORA35B-201ENST00000607417 129 ntBASIC4.42□□□□□ -1.7
TOP2AP11388 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
TOP2AP11388 AL356274.1-201ENST00000617064 410 ntBASIC4.42□□□□□ -1.7
TOP2AP11388 MIR7153-201ENST00000637758 57 ntBASIC4.42□□□□□ -1.7
TOP2AP11388 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.42□□□□□ -1.7
TOP2AP11388 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
TOP2AP11388 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
TOP2AP11388 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
TOP2AP11388 AC012078.1-201ENST00000405035 1646 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 AL512633.1-201ENST00000399931 655 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 RPS12P2-201ENST00000439728 269 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 AC011816.1-201ENST00000441346 546 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP2AP11388 HMGB1P25-201ENST00000468402 607 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.41□□□□□ -1.7
TOP2AP11388 RN7SL636P-201ENST00000497504 294 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 ENSA-210ENST00000503241 574 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP2AP11388 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP2AP11388 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP2AP11388 AC092851.1-201ENST00000535964 478 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.41□□□□□ -1.7
TOP2AP11388 AL021368.2-201ENST00000606125 5352 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
TOP2AP11388 AC009313.2-201ENST00000417893 1941 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
TOP2AP11388 AL079342.1-201ENST00000401460 267 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 AL590004.2-201ENST00000404787 371 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 AC069218.2-201ENST00000411665 344 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC4.41□□□□□ -1.7
TOP2AP11388 AL450263.2-201ENST00000439400 589 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.41□□□□□ -1.7
TOP2AP11388 KLHL2P1-201ENST00000508691 521 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 MIR1273D-201ENST00000577266 86 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 MIR4648-201ENST00000580107 72 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 BDH2P1-201ENST00000602288 736 ntBASIC4.41□□□□□ -1.7
TOP2AP11388 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC4.41□□□□□ -1.7
TOP2AP11388 AC092079.1-201ENST00000558620 1985 ntBASIC4.4□□□□□ -1.7
TOP2AP11388 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
TOP2AP11388 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.4□□□□□ -1.7
TOP2AP11388 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
TOP2AP11388 EI24P2-201ENST00000397776 1076 ntBASIC4.4□□□□□ -1.71
TOP2AP11388 RNU6ATAC40P-201ENST00000408580 137 ntBASIC4.4□□□□□ -1.71
TOP2AP11388 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC4.4□□□□□ -1.71
TOP2AP11388 AC005189.1-201ENST00000431286 310 ntBASIC4.4□□□□□ -1.71
TOP2AP11388 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.4□□□□□ -1.71
TOP2AP11388 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.4□□□□□ -1.71
TOP2AP11388 AL392112.1-201ENST00000605115 829 ntBASIC4.4□□□□□ -1.71
TOP2AP11388 AC009159.1-201ENST00000618386 642 ntBASIC4.4□□□□□ -1.71
TOP2AP11388 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.39□□□□□ -1.71
TOP2AP11388 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
TOP2AP11388 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.39□□□□□ -1.71
TOP2AP11388 MTND5P19-201ENST00000424872 1794 ntBASIC4.39□□□□□ -1.71
TOP2AP11388 BX276092.3-201ENST00000424182 230 ntBASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 162.4 ms