Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 AC091516.1-201ENST00000549191 703 ntBASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 AC025627.2-201ENST00000576220 160 ntBASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 AC025588.2-201ENST00000604851 466 ntBASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 AL592436.1-201ENST00000605135 558 ntBASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 AC107952.2-201ENST00000606048 486 ntBASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 AC078899.5-201ENST00000612475 178 ntBASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 AC092650.2-201ENST00000619984 902 ntBASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 AP000770.2-201ENST00000623694 100 ntBASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
RAB40ALP0C0E4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 RNU4-28P-201ENST00000364739 141 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 Y_RNA.311-201ENST00000365068 96 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 SNORD82-201ENST00000365530 70 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 RNU6-213P-201ENST00000384051 104 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 Y_RNA.493-201ENST00000384422 102 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 RPS6P12-201ENST00000432491 726 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 RPL39P6-201ENST00000448289 150 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 CREM-226ENST00000469949 721 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 OR5H5P-201ENST00000503164 928 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 RN7SKP287-201ENST00000516546 266 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 RN7SKP116-201ENST00000516902 319 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AC023050.2-201ENST00000544968 387 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AC009712.1-201ENST00000564938 316 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 MTATP6P24-201ENST00000576835 677 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 MIR4429-201ENST00000580105 73 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AC068790.5-201ENST00000602741 355 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AC093424.1-201ENST00000604999 338 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AC069304.2-201ENST00000605154 435 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 MIR92B-201ENST00000607575 96 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 MIR6868-201ENST00000611215 58 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 RMST_9.1-201ENST00000619945 193 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AL354798.1-201ENST00000622505 329 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AC067931.1-201ENST00000624190 671 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 MIR4278-201ENST00000636094 69 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 OR8B1P-202ENST00000641132 1178 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 AL356489.2-201ENST00000566968 3528 ntBASIC3.81□□□□□ -1.8
RAB40ALP0C0E4 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 AC005539.1-201ENST00000443768 1479 ntBASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 GDI2P1-201ENST00000429312 1336 ntBASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 FAM133CP-201ENST00000332869 704 ntBASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 RNU6-339P-201ENST00000384310 107 ntBASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 RNU6-83P-201ENST00000384568 112 ntBASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 ATP5F1P3-201ENST00000397213 657 ntBASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 ARF4P3-201ENST00000397387 509 ntBASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 PTMAP2-201ENST00000397627 327 ntBASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 RNA5SP306-201ENST00000411087 107 ntBASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 AL008987.1-201ENST00000415528 237 ntBASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 TIMM9P2-201ENST00000419324 266 ntBASIC3.8□□□□□ -1.8
RAB40ALP0C0E4 AC092647.1-201ENST00000420654 287 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms