Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 GMPSP1-201ENST00000514075 579 ntBASIC2.66□□□□□ -1.98
SSNA1O43805 RNA5SP76-201ENST00000516277 87 ntBASIC2.66□□□□□ -1.98
SSNA1O43805 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
SSNA1O43805 OSBPL9P3-201ENST00000534523 595 ntBASIC2.66□□□□□ -1.98
SSNA1O43805 AC005476.1-201ENST00000554427 397 ntBASIC2.66□□□□□ -1.98
SSNA1O43805 AC090888.3-201ENST00000558917 509 ntBASIC2.66□□□□□ -1.98
SSNA1O43805 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC2.66□□□□□ -1.98
SSNA1O43805 AC096947.1-201ENST00000603233 470 ntBASIC2.66□□□□□ -1.98
SSNA1O43805 AC015802.5-201ENST00000607478 399 ntBASIC2.66□□□□□ -1.98
SSNA1O43805 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.66□□□□□ -1.98
SSNA1O43805 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
SSNA1O43805 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC2.66□□□□□ -1.98
SSNA1O43805 AC018445.2-201ENST00000622987 260 ntBASIC2.66□□□□□ -1.98
SSNA1O43805 CCT5-215ENST00000625723 135 ntTSL 5 BASIC2.66□□□□□ -1.98
SSNA1O43805 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
SSNA1O43805 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.65□□□□□ -1.98
SSNA1O43805 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.65□□□□□ -1.98
SSNA1O43805 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SSNA1O43805 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SSNA1O43805 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
SSNA1O43805 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SSNA1O43805 MIR181B1-201ENST00000385240 110 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
SSNA1O43805 MIR550A3-201ENST00000390735 95 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 AL022722.2-201ENST00000402519 180 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.65□□□□□ -1.99
SSNA1O43805 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SSNA1O43805 SSXP9-201ENST00000417503 292 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.65□□□□□ -1.99
SSNA1O43805 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.65□□□□□ -1.99
SSNA1O43805 AC073508.1-201ENST00000428866 656 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 SNRPEP4-201ENST00000435815 279 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SSNA1O43805 MUPP-201ENST00000438111 566 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 RPL21P2-201ENST00000440049 481 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 RPL23AP58-201ENST00000440453 469 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC2.65□□□□□ -1.99
SSNA1O43805 AC092685.1-201ENST00000447960 1243 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 TPT1P12-201ENST00000448968 492 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC2.65□□□□□ -1.99
SSNA1O43805 NDUFA12P1-201ENST00000455914 406 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 AL590639.1-201ENST00000456484 337 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 RPL21P41-201ENST00000459863 264 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 AC008571.1-201ENST00000467232 300 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
SSNA1O43805 AC111000.2-201ENST00000507775 550 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
SSNA1O43805 MTCYBP37-201ENST00000510642 1133 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC2.65□□□□□ -1.99
SSNA1O43805 AC093853.1-201ENST00000515689 483 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.65□□□□□ -1.99
SSNA1O43805 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC2.65□□□□□ -1.99
SSNA1O43805 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC2.65□□□□□ -1.99
SSNA1O43805 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC2.65□□□□□ -1.99
SSNA1O43805 AL121603.1-201ENST00000553815 142 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC2.65□□□□□ -1.99
SSNA1O43805 MIR4277-201ENST00000578298 84 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 AC017100.2-201ENST00000584628 355 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.65□□□□□ -1.99
SSNA1O43805 AL031985.2-201ENST00000600955 480 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 MIR7851-201ENST00000610611 160 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 SDR42E1P1-201ENST00000611327 477 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 CR589904.2-201ENST00000612533 440 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 AL157817.1-201ENST00000614264 790 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.65□□□□□ -1.99
SSNA1O43805 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
SSNA1O43805 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.65□□□□□ -1.99
SSNA1O43805 CR788268.1-201ENST00000603931 1809 ntBASIC2.65□□□□□ -1.99
SSNA1O43805 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
SSNA1O43805 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSNA1O43805 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
SSNA1O43805 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SSNA1O43805 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.64□□□□□ -1.99
SSNA1O43805 RNU6-543P-201ENST00000362576 108 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
SSNA1O43805 RPL32P23-201ENST00000397237 405 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 MTCO3P12-201ENST00000416718 547 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 RPS3AP9-201ENST00000417027 792 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 SAR1AP4-201ENST00000429225 591 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC2.64□□□□□ -1.99
SSNA1O43805 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC2.64□□□□□ -1.99
SSNA1O43805 RSL24D1P2-201ENST00000445584 366 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 PLGLA-201ENST00000465668 449 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC2.64□□□□□ -1.99
SSNA1O43805 AC104986.1-201ENST00000517978 436 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 ERHP1-201ENST00000523006 310 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC2.64□□□□□ -1.99
SSNA1O43805 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC2.64□□□□□ -1.99
SSNA1O43805 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC2.64□□□□□ -1.99
SSNA1O43805 AC006504.3-201ENST00000586818 523 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 AC010591.1-201ENST00000603941 649 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 AC025588.3-201ENST00000604182 274 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 AC079610.2-201ENST00000604818 690 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 AC004775.1-201ENST00000607389 753 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SSNA1O43805 AC092650.2-201ENST00000619984 902 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 AC097372.4-201ENST00000625025 466 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 AC127502.3-201ENST00000636170 1206 ntBASIC2.64□□□□□ -1.99
SSNA1O43805 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms