Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 MTCYBP31-201ENST00000438855 1122 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 SNORD108-201ENST00000459332 71 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 AP001992.1-205ENST00000462248 379 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 RPS3AP43-201ENST00000479743 781 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 MTND3P3-201ENST00000505004 126 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC121161.1-201ENST00000510606 652 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC108471.1-201ENST00000513977 287 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC112198.4-201ENST00000515450 351 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 DUXAP6-201ENST00000553858 601 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC106734.1-201ENST00000568646 663 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 BNIP3P11-201ENST00000603878 563 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL162274.2-201ENST00000614406 332 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL353743.1-202ENST00000431724 1695 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 RNU6-185P-201ENST00000384421 107 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 MIR124-3-201ENST00000384866 87 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 SKINT1L-201ENST00000401057 817 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 RNU2-17P-201ENST00000410290 190 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 LINC01347-201ENST00000417964 355 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL606495.1-201ENST00000422100 813 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC012497.1-201ENST00000429392 575 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC069540.1-201ENST00000446320 988 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL096829.2-201ENST00000446582 742 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 HMGN1P18-201ENST00000457642 277 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 HMGB3P30-201ENST00000457863 606 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 RNU6-1218P-201ENST00000458990 108 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 RPL23AP67-201ENST00000465341 474 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC109925.1-201ENST00000478069 331 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC021205.2-201ENST00000480069 347 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC112198.1-201ENST00000505369 1220 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 POU5F1P7-201ENST00000508759 541 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 SNORA64.4-201ENST00000516632 81 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 RNU6-347P-201ENST00000516658 105 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 C1DP5-201ENST00000525775 383 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL049870.4-201ENST00000555741 486 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 PSMA6P4-201ENST00000603247 718 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL513477.2-201ENST00000607858 568 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC006249.1-201ENST00000621223 471 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL356321.1-201ENST00000621360 228 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 CR392039.4-201ENST00000624968 501 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 MTND5P27-201ENST00000428871 1720 ntBASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.24□□□□□ -1.89
TMX2-CTNND1H3BSU7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 DCAF13P3-201ENST00000561147 1334 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 RPL23AP57-201ENST00000332361 466 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 RNU6-666P-201ENST00000363499 107 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 EI24P2-201ENST00000397776 1076 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL445183.3-201ENST00000414168 502 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 MTCO3P4-201ENST00000419236 787 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 PNRC2P1-201ENST00000423940 420 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 RPL7P44-201ENST00000424827 742 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 MTCO3P21-201ENST00000430791 643 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 FTH1P1-201ENST00000437933 532 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 AC006994.1-201ENST00000438212 839 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.23□□□□□ -1.89
TMX2-CTNND1H3BSU7 HMGB1P26-201ENST00000452520 628 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms