Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL627309.6-201ENST00000606857 840 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 AC000123.2-201ENST00000623124 461 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CNTN3Q9P232 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNTN3Q9P232 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNTN3Q9P232 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNTN3Q9P232 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CNTN3Q9P232 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CNTN3Q9P232 AC130650.2-201ENST00000618736 2403 ntBASIC5.93□□□□□ -1.46
CNTN3Q9P232 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
CNTN3Q9P232 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
CNTN3Q9P232 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
CNTN3Q9P232 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
CNTN3Q9P232 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNTN3Q9P232 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNTN3Q9P232 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNTN3Q9P232 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 MIR369-201ENST00000362155 70 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 RNA5SP258-201ENST00000362750 119 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 RNU6-97P-201ENST00000363387 104 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNTN3Q9P232 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 RNU6-1013P-201ENST00000384180 107 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 MIR454-201ENST00000390180 115 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 RNA5SP339-201ENST00000390987 122 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 AL359634.1-202ENST00000404721 284 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 ARL5AP1-201ENST00000418991 388 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 Z82205.1-201ENST00000428456 297 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 RPL7L1P9-201ENST00000431298 745 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 RPL34P6-201ENST00000432390 345 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 TIMM9P1-201ENST00000436122 256 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 AL049714.1-201ENST00000466686 347 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC087879.1-201ENST00000474343 374 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 RPL21P99-201ENST00000480369 423 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 RN7SL447P-201ENST00000494711 245 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 FAM206BP-201ENST00000510179 541 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 RNA5SP34-201ENST00000516887 130 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 Y_RNA.718-201ENST00000517110 102 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 AP001029.3-201ENST00000588063 596 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 OR7E18P-201ENST00000592589 702 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC018809.2-201ENST00000602436 3823 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC009597.2-201ENST00000604659 592 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 AL596245.1-201ENST00000618994 362 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC006206.1-201ENST00000544842 3387 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC004972.1-201ENST00000623934 2209 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 ADAM24P-201ENST00000398655 2101 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 AC006484.1-201ENST00000435086 1884 ntBASIC5.92□□□□□ -1.46
CNTN3Q9P232 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
CNTN3Q9P232 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
CNTN3Q9P232 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
CNTN3Q9P232 AC009902.3-201ENST00000606235 2172 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CNTN3Q9P232 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CNTN3Q9P232 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 AP004289.2-201ENST00000444413 1457 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
CNTN3Q9P232 PABPC1P6-201ENST00000445594 1829 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 OR5P1P-201ENST00000299512 925 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 Y_RNA.367-201ENST00000365544 101 ntBASIC5.91□□□□□ -1.46
CNTN3Q9P232 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CNTN3Q9P232 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
CNTN3Q9P232 Y_RNA.459-201ENST00000384251 102 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms