Protein–RNA interactions for Protein: Q9BQS8

FYCO1, FYVE and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 1,478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FYCO1Q9BQS8 AP000857.1-201ENST00000532151 543 ntBASIC4.09□□□□□ -1.75
FYCO1Q9BQS8 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
FYCO1Q9BQS8 AL109741.3-201ENST00000561748 592 ntBASIC4.09□□□□□ -1.75
FYCO1Q9BQS8 AL021368.2-201ENST00000606125 5352 ntBASIC4.09□□□□□ -1.76
FYCO1Q9BQS8 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.08□□□□□ -1.76
FYCO1Q9BQS8 ATF1P1-201ENST00000406040 927 ntBASIC4.08□□□□□ -1.76
FYCO1Q9BQS8 AL159169.1-201ENST00000421119 127 ntBASIC4.08□□□□□ -1.76
FYCO1Q9BQS8 RPS6P12-201ENST00000432491 726 ntBASIC4.08□□□□□ -1.76
FYCO1Q9BQS8 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
FYCO1Q9BQS8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.08□□□□□ -1.76
FYCO1Q9BQS8 APOA2-205ENST00000468465 421 ntTSL 2 BASIC4.08□□□□□ -1.76
FYCO1Q9BQS8 AC100870.1-201ENST00000522035 505 ntBASIC4.08□□□□□ -1.76
FYCO1Q9BQS8 AL133271.1-201ENST00000538229 291 ntBASIC4.08□□□□□ -1.76
FYCO1Q9BQS8 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC4.08□□□□□ -1.76
FYCO1Q9BQS8 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC4.08□□□□□ -1.76
FYCO1Q9BQS8 AP000526.1-201ENST00000603308 1388 ntBASIC4.08□□□□□ -1.76
FYCO1Q9BQS8 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
FYCO1Q9BQS8 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.08□□□□□ -1.76
FYCO1Q9BQS8 AC046144.1-201ENST00000478559 1853 ntBASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 SNORA70B-201ENST00000384210 135 ntBASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 AL590004.2-201ENST00000404787 371 ntBASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 RNU1-41P-201ENST00000516161 162 ntBASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 RNU1-48P-201ENST00000516400 162 ntBASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 AC007621.1-201ENST00000604544 437 ntBASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 AC016717.2-201ENST00000609089 5141 ntBASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.07□□□□□ -1.76
FYCO1Q9BQS8 FTH1P1-201ENST00000437933 532 ntBASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 AL662791.1-201ENST00000441992 928 ntBASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 MRPL50P4-201ENST00000446432 475 ntBASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 UBTFL10-201ENST00000528532 562 ntBASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 AL590808.1-201ENST00000618696 141 ntBASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 AC138915.3-201ENST00000562908 1389 ntBASIC4.06□□□□□ -1.76
FYCO1Q9BQS8 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 RNA5SP508-201ENST00000411327 119 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 RPLP0P7-201ENST00000416050 667 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 AP001646.1-201ENST00000527936 915 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 AC074140.1-201ENST00000621617 208 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 CTSLP2-204ENST00000629029 392 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 ELF2P3-201ENST00000445099 1506 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 AP006437.1-201ENST00000641440 3685 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 RNU1-100P-201ENST00000365255 165 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 AC080125.1-201ENST00000414888 684 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 NPM1P11-201ENST00000417106 855 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 RPL7P10-201ENST00000417407 739 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 FCF1P1-201ENST00000432690 571 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 HSD52-202ENST00000436225 772 ntTSL 3 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 RPL23AP15-201ENST00000450202 459 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 TRBV12-1-201ENST00000479785 344 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 AC004825.2-201ENST00000616634 455 ntBASIC4.05□□□□□ -1.76
FYCO1Q9BQS8 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FYCO1Q9BQS8 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FYCO1Q9BQS8 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC4.04□□□□□ -1.76
FYCO1Q9BQS8 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
FYCO1Q9BQS8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC4.04□□□□□ -1.76
FYCO1Q9BQS8 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
FYCO1Q9BQS8 RNA5SP289-201ENST00000362332 137 ntBASIC4.04□□□□□ -1.76
FYCO1Q9BQS8 AL512633.1-201ENST00000399931 655 ntBASIC4.04□□□□□ -1.76
FYCO1Q9BQS8 MYL8P-204ENST00000431574 518 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms