Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC4.68□□□□□ -1.66
SMOQ99835 CCNG2P1-201ENST00000549521 1000 ntBASIC4.68□□□□□ -1.66
SMOQ99835 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMOQ99835 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SMOQ99835 AL121834.1-201ENST00000572284 509 ntBASIC4.68□□□□□ -1.66
SMOQ99835 MIR4472-2-201ENST00000582069 67 ntBASIC4.68□□□□□ -1.66
SMOQ99835 MAGOH2P-202ENST00000584384 429 ntBASIC4.68□□□□□ -1.66
SMOQ99835 HMGB2P1-201ENST00000591146 634 ntBASIC4.68□□□□□ -1.66
SMOQ99835 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC4.68□□□□□ -1.66
SMOQ99835 AC112187.2-201ENST00000604345 283 ntBASIC4.68□□□□□ -1.66
SMOQ99835 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC4.68□□□□□ -1.66
SMOQ99835 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.68□□□□□ -1.66
SMOQ99835 AL359535.1-201ENST00000612100 1087 ntBASIC4.68□□□□□ -1.66
SMOQ99835 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SMOQ99835 AC091905.2-201ENST00000623143 306 ntBASIC4.68□□□□□ -1.66
SMOQ99835 U6.101-201ENST00000637707 76 ntBASIC4.68□□□□□ -1.66
SMOQ99835 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.68□□□□□ -1.66
SMOQ99835 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.68□□□□□ -1.66
SMOQ99835 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMOQ99835 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMOQ99835 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SMOQ99835 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.68□□□□□ -1.66
SMOQ99835 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.68□□□□□ -1.66
SMOQ99835 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.68□□□□□ -1.66
SMOQ99835 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMOQ99835 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
SMOQ99835 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.67□□□□□ -1.66
SMOQ99835 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMOQ99835 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SMOQ99835 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMOQ99835 AC104118.1-201ENST00000607625 1589 ntBASIC4.67□□□□□ -1.66
SMOQ99835 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMOQ99835 RNY4P24-201ENST00000362735 96 ntBASIC4.67□□□□□ -1.66
SMOQ99835 RNU6-289P-201ENST00000364093 107 ntBASIC4.67□□□□□ -1.66
SMOQ99835 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC4.67□□□□□ -1.66
SMOQ99835 SNORD96B-201ENST00000386148 79 ntBASIC4.67□□□□□ -1.66
SMOQ99835 MIR3065-201ENST00000390137 79 ntBASIC4.67□□□□□ -1.66
SMOQ99835 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.67□□□□□ -1.66
SMOQ99835 AIMP1P1-201ENST00000418670 937 ntBASIC4.67□□□□□ -1.66
SMOQ99835 MTND4LP11-201ENST00000422184 280 ntBASIC4.67□□□□□ -1.66
SMOQ99835 RPS29P17-201ENST00000430795 166 ntBASIC4.67□□□□□ -1.66
SMOQ99835 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.67□□□□□ -1.66
SMOQ99835 DNAJC19P4-201ENST00000440115 345 ntBASIC4.67□□□□□ -1.66
SMOQ99835 AC244505.5-201ENST00000443639 207 ntBASIC4.67□□□□□ -1.66
SMOQ99835 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.67□□□□□ -1.66
SMOQ99835 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.67□□□□□ -1.66
SMOQ99835 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.67□□□□□ -1.66
SMOQ99835 RN7SL98P-201ENST00000462271 300 ntBASIC4.67□□□□□ -1.66
SMOQ99835 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMOQ99835 AP000893.1-201ENST00000474462 794 ntBASIC4.67□□□□□ -1.66
SMOQ99835 AC126182.1-201ENST00000478134 357 ntBASIC4.67□□□□□ -1.66
SMOQ99835 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.67□□□□□ -1.66
SMOQ99835 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.67□□□□□ -1.66
SMOQ99835 RN7SL810P-201ENST00000493031 276 ntBASIC4.67□□□□□ -1.66
SMOQ99835 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.67□□□□□ -1.66
SMOQ99835 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.67□□□□□ -1.66
SMOQ99835 RNA5SP497-201ENST00000516081 97 ntBASIC4.67□□□□□ -1.66
SMOQ99835 PAICSP4-201ENST00000517543 1253 ntBASIC4.67□□□□□ -1.66
SMOQ99835 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.67□□□□□ -1.66
SMOQ99835 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMOQ99835 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.67□□□□□ -1.66
SMOQ99835 AC068587.4-201ENST00000533893 186 ntBASIC4.67□□□□□ -1.66
SMOQ99835 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.67□□□□□ -1.66
SMOQ99835 EEF1B2P4-201ENST00000551398 348 ntBASIC4.67□□□□□ -1.66
SMOQ99835 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.67□□□□□ -1.66
SMOQ99835 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC4.67□□□□□ -1.66
SMOQ99835 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.67□□□□□ -1.66
SMOQ99835 AC022306.2-201ENST00000617563 647 ntBASIC4.67□□□□□ -1.66
SMOQ99835 DLEU1_2.1-201ENST00000617920 342 ntBASIC4.67□□□□□ -1.66
SMOQ99835 AC022106.2-201ENST00000620114 757 ntBASIC4.67□□□□□ -1.66
SMOQ99835 AC011944.2-201ENST00000624440 683 ntBASIC4.67□□□□□ -1.66
SMOQ99835 SEPT14P19-203ENST00000633205 211 ntBASIC4.67□□□□□ -1.66
SMOQ99835 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMOQ99835 MTND5P26-201ENST00000426018 1752 ntBASIC4.67□□□□□ -1.66
SMOQ99835 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.67□□□□□ -1.66
SMOQ99835 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMOQ99835 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.67□□□□□ -1.66
SMOQ99835 DCAF13P1-201ENST00000495256 1330 ntBASIC4.67□□□□□ -1.66
SMOQ99835 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SMOQ99835 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
SMOQ99835 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMOQ99835 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMOQ99835 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMOQ99835 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMOQ99835 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SMOQ99835 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.66□□□□□ -1.66
SMOQ99835 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
SMOQ99835 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SMOQ99835 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.66□□□□□ -1.66
SMOQ99835 RPL32P3-201ENST00000359025 275 ntBASIC4.66□□□□□ -1.66
SMOQ99835 MIR331-201ENST00000362302 94 ntBASIC4.66□□□□□ -1.66
SMOQ99835 RN7SKP224-201ENST00000364140 325 ntBASIC4.66□□□□□ -1.66
SMOQ99835 ARF4P3-201ENST00000397387 509 ntBASIC4.66□□□□□ -1.66
SMOQ99835 EIF5P1-201ENST00000400019 1231 ntBASIC4.66□□□□□ -1.66
SMOQ99835 MIR1271-201ENST00000408537 86 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AC022028.1-201ENST00000412054 408 ntBASIC4.66□□□□□ -1.66
SMOQ99835 USP9YP13-201ENST00000417797 480 ntBASIC4.66□□□□□ -1.66
SMOQ99835 EIF1P1-201ENST00000421436 341 ntBASIC4.66□□□□□ -1.66
SMOQ99835 OR8F1P-201ENST00000425243 930 ntBASIC4.66□□□□□ -1.66
SMOQ99835 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms