Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 SNORD56.2-201ENST00000363242 71 ntBASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 MIR525-201ENST00000384978 85 ntBASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 RPL23AP47-201ENST00000408017 460 ntBASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 PDCL2P1-201ENST00000419302 352 ntBASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 RPS27AP14-201ENST00000422868 454 ntBASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 USP9YP36-201ENST00000424581 829 ntBASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 Z80107.2-201ENST00000445127 392 ntBASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 MTCO3P20-201ENST00000454926 688 ntBASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AP000942.1-201ENST00000463969 747 ntBASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 RPL39P36-201ENST00000490784 156 ntBASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AC011352.3-201ENST00000505162 593 ntBASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AL157687.1-201ENST00000554853 619 ntBASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AL512360.1-201ENST00000555346 234 ntBASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AL022401.1-201ENST00000619498 108 ntBASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5□□□□□ -1.61
CDK5RAP1Q96SZ6 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AL442639.1-201ENST00000625030 1899 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 MIR217-201ENST00000384817 110 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 MIR192-201ENST00000384915 110 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 SNORA75.4-201ENST00000391278 119 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 RN7SKP267-201ENST00000410381 285 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 RNU6-77P-201ENST00000410554 91 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AL359704.1-201ENST00000411586 781 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AC004987.3-201ENST00000413879 771 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 VN1R36P-201ENST00000414936 291 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AL590806.1-201ENST00000415818 853 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AL513185.2-201ENST00000425543 193 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 RAD23BP3-201ENST00000454157 1152 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 RPL7P38-201ENST00000488396 739 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 KLRA1P-201ENST00000503499 986 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 HIF1AP1-201ENST00000553642 175 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AL121821.2-201ENST00000556081 394 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AC116312.1-201ENST00000606841 314 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 AC104010.1-201ENST00000616889 150 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 MIR6853-201ENST00000619642 74 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 DDX18P3-201ENST00000404856 2007 ntBASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.99□□□□□ -1.61
CDK5RAP1Q96SZ6 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDK5RAP1Q96SZ6 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.98□□□□□ -1.61
CDK5RAP1Q96SZ6 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDK5RAP1Q96SZ6 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDK5RAP1Q96SZ6 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDK5RAP1Q96SZ6 AC010928.1-201ENST00000592477 1447 ntBASIC4.98□□□□□ -1.61
CDK5RAP1Q96SZ6 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.98□□□□□ -1.61
CDK5RAP1Q96SZ6 AC010329.2-201ENST00000595195 2737 ntBASIC4.98□□□□□ -1.61
CDK5RAP1Q96SZ6 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDK5RAP1Q96SZ6 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDK5RAP1Q96SZ6 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CDK5RAP1Q96SZ6 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
CDK5RAP1Q96SZ6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CDK5RAP1Q96SZ6 SNORD81.2-201ENST00000365153 76 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms