Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 HMGB3P20-201ENST00000417997 600 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 TCEA1P2-201ENST00000420496 906 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 NEK4P1-201ENST00000433383 879 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 SEPT7P5-201ENST00000434048 306 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 Z74696.2-201ENST00000436514 498 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AC093155.1-201ENST00000440164 826 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AC099563.1-201ENST00000456086 418 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 snoU13.4-201ENST00000458916 104 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 RPL35AP28-201ENST00000459730 331 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 HMGB1P25-201ENST00000468402 607 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 RPS3AP6-201ENST00000484430 795 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AC007686.1-201ENST00000488511 463 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 CAB39P1-201ENST00000502277 460 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 RN7SKP60-201ENST00000516985 239 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 NDUFA5P2-201ENST00000519723 344 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AL139174.1-201ENST00000531489 886 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 EEF1B2P4-201ENST00000551398 348 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AC006960.3-201ENST00000561845 705 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AC234771.5-201ENST00000600161 514 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AL163642.2-201ENST00000604722 1019 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AL356218.2-201ENST00000605264 187 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AC092653.1-201ENST00000608509 531 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AC231759.1-201ENST00000616455 597 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AC079684.1-201ENST00000621405 437 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 CYP3A51P-201ENST00000633513 256 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AL672296.1-201ENST00000427780 2158 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 Z99496.1-201ENST00000469424 1477 ntBASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
NSMCE2Q96MF7 AC021755.1-201ENST00000559747 1447 ntBASIC3.53□□□□□ -1.85
NSMCE2Q96MF7 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 RNA5SP97-201ENST00000365006 84 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 SNORD65.1-201ENST00000390889 71 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 Y_RNA.578-201ENST00000390903 88 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 RPS26P8-201ENST00000393490 348 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 EI24P2-201ENST00000397776 1076 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 MTCO1P56-201ENST00000401674 224 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 RNU4-6P-201ENST00000410804 122 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 LUZP4P1-201ENST00000415420 344 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 AC011242.1-201ENST00000433596 1158 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 NECAP1P2-201ENST00000455668 727 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 BTF3P5-201ENST00000457252 467 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 PCBP2P3-201ENST00000509726 843 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 AC093840.1-201ENST00000511599 336 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 AC108064.1-201ENST00000513791 460 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 RNU6-27P-201ENST00000516146 107 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 AP001189.2-201ENST00000527320 189 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 DNAJC19P3-201ENST00000594491 331 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 RMST_8.1-201ENST00000610287 165 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 AC100827.5-201ENST00000615883 426 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 PLCE1P1-201ENST00000622094 305 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 AP003485.1-201ENST00000625093 753 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 MTCO1P23-201ENST00000415223 1526 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 AC073429.2-201ENST00000569694 1444 ntBASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
NSMCE2Q96MF7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NSMCE2Q96MF7 AL049780.3-201ENST00000624612 1583 ntBASIC3.51□□□□□ -1.85
NSMCE2Q96MF7 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
NSMCE2Q96MF7 AL645568.2-201ENST00000432815 1337 ntBASIC3.51□□□□□ -1.85
NSMCE2Q96MF7 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NSMCE2Q96MF7 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
NSMCE2Q96MF7 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NSMCE2Q96MF7 RNU6-50P-201ENST00000362356 103 ntBASIC3.51□□□□□ -1.85
NSMCE2Q96MF7 MIR591-201ENST00000385290 95 ntBASIC3.51□□□□□ -1.85
NSMCE2Q96MF7 RNA5SP424-201ENST00000390988 115 ntBASIC3.51□□□□□ -1.85
NSMCE2Q96MF7 AL136116.1-201ENST00000403591 381 ntBASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms