Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 NANOGP5-201ENST00000424456 877 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AL035410.1-201ENST00000427409 427 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 NANOGP2-201ENST00000435391 727 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 RRM2P4-201ENST00000441721 562 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AL358232.1-201ENST00000448030 501 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC110792.1-201ENST00000491826 472 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 GTF2IP9-201ENST00000502460 301 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC109458.1-201ENST00000508858 316 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 NDUFB4P9-201ENST00000511646 388 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 SNORA67.7-201ENST00000516664 135 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC027309.2-201ENST00000520566 192 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AL049838.1-201ENST00000563647 981 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC053481.3-201ENST00000577881 843 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 MTCO2P2-201ENST00000591258 225 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC022916.3-201ENST00000592961 742 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC113368.1-201ENST00000603736 382 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC091946.2-201ENST00000606105 291 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC024257.5-201ENST00000612739 531 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AC090116.1-201ENST00000615679 446 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 AL139089.1-201ENST00000620372 975 ntBASIC4.03□□□□□ -1.76
HDAC11Q96DB2 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.03□□□□□ -1.76
HDAC11Q96DB2 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.77
HDAC11Q96DB2 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 RNVU1-3-201ENST00000364313 161 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 PPIAP31-201ENST00000405422 495 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 RNU6-584P-201ENST00000410350 95 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 RNU2-42P-201ENST00000410697 113 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 MTATP6P20-201ENST00000414147 562 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AL161449.1-201ENST00000414531 1199 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 OFD1P18Y-201ENST00000420889 959 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 MRPS36P1-201ENST00000421291 307 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 MTND2P9-201ENST00000422293 931 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 RPL23AP83-201ENST00000434984 473 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 EEF1A1P39-201ENST00000440791 250 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AL589880.1-201ENST00000448271 287 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 RPS17P13-201ENST00000448974 407 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 RPL7L1P8-201ENST00000469911 741 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AC108734.3-201ENST00000481241 1165 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 MTCO3P44-201ENST00000510977 541 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AC026726.1-201ENST00000512859 601 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 MIR2114-201ENST00000516645 80 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 NDUFA5P2-201ENST00000519723 344 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 OR7E13P-201ENST00000526052 910 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 MIR4286-201ENST00000580651 93 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 MIR4444-1-201ENST00000581696 74 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 MIR4444-2-201ENST00000584390 74 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AL390838.2-201ENST00000602394 274 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 RPP40P2-201ENST00000603596 712 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AC021749.1-201ENST00000604322 607 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AC112230.1-201ENST00000604342 547 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AC090912.3-201ENST00000609775 533 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AL356863.1-201ENST00000623378 1080 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 MKKS-204ENST00000639674 192 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 AP002001.2-201ENST00000529025 1469 ntBASIC4.02□□□□□ -1.77
HDAC11Q96DB2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.02□□□□□ -1.77
HDAC11Q96DB2 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HDAC11Q96DB2 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HDAC11Q96DB2 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.01□□□□□ -1.77
HDAC11Q96DB2 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HDAC11Q96DB2 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HDAC11Q96DB2 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC4.01□□□□□ -1.77
HDAC11Q96DB2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.01□□□□□ -1.77
HDAC11Q96DB2 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HDAC11Q96DB2 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
HDAC11Q96DB2 RN7SKP280-201ENST00000364196 304 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 139.4 ms