Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 SNORA74C-2-201ENST00000411179 201 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 RPS25P9-201ENST00000435591 252 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 RPL23AP46-201ENST00000438548 490 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 NOTCH2P1-201ENST00000443481 624 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 RPL26P28-201ENST00000451325 435 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 ACTR3P3-201ENST00000480448 893 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AC110792.1-201ENST00000491826 472 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 ELOCP32-201ENST00000548625 324 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 CCNG2P1-201ENST00000549521 1000 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AC005255.1-201ENST00000593748 216 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AP002360.3-201ENST00000607673 710 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 U73479.1-201ENST00000618062 168 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AL354798.1-201ENST00000622505 329 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AC091953.5-201ENST00000622919 233 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 AC008013.2-202ENST00000637965 364 ntBASIC4.54□□□□□ -1.68
HERC6Q8IVU3 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.54□□□□□ -1.68
HERC6Q8IVU3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 MTCO1P24-201ENST00000515438 1558 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 RNA5SP151-201ENST00000365632 117 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 MT-TC-201ENST00000387405 66 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 AL450338.1-201ENST00000407987 512 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 AL160275.2-201ENST00000412010 394 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 USP9YP33-201ENST00000412220 421 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 USP9YP35-201ENST00000435696 412 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 RSL24D1P3-201ENST00000449255 495 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 VN1R40P-201ENST00000455196 941 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 ATG12P2-201ENST00000456830 416 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 FAM172BP-201ENST00000487497 1089 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 AC093767.1-201ENST00000504523 156 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 AC093281.2-201ENST00000510153 597 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 MIR5186-201ENST00000577504 120 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 MIR4637-201ENST00000582405 84 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 AC103881.1-201ENST00000603476 538 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 BNIP3P11-201ENST00000603878 563 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 LINC00901.1-201ENST00000617252 152 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 Z99129.2-201ENST00000619967 314 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 AC131159.1-201ENST00000621854 213 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 AC007546.2-201ENST00000623996 360 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 AC017037.3-201ENST00000625016 472 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 CYP3A51P-201ENST00000633513 256 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 AL136964.1-201ENST00000622038 2990 ntBASIC4.53□□□□□ -1.68
HERC6Q8IVU3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HERC6Q8IVU3 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.53□□□□□ -1.69
HERC6Q8IVU3 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 KPNA2P2-201ENST00000419546 1489 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 NMD3P1-201ENST00000439704 1488 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 OR52B1P-201ENST00000316506 909 ntBASIC4.52□□□□□ -1.69
HERC6Q8IVU3 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HERC6Q8IVU3 RNU6-931P-201ENST00000363850 107 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms