Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 HMGN1P15-201ENST00000513870 295 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 SNORD59.2-201ENST00000516873 68 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 RNU6-711P-201ENST00000517255 106 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 OR5AK1P-201ENST00000524837 922 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 MTCO3P15-201ENST00000526563 574 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 GNRHR2P1-201ENST00000555315 631 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 TRAV15-201ENST00000556680 249 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 AL845331.3-202ENST00000562856 261 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 AC022655.2-201ENST00000577280 318 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 AC008962.1-201ENST00000605729 304 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 AC004832.5-201ENST00000608677 401 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 AC009570.1-201ENST00000609599 745 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 AC090246.1-201ENST00000616499 426 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 MIR6730-201ENST00000622213 67 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 AC087821.2-201ENST00000637086 450 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 AF117829.1-206ENST00000621883 3802 ntBASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.62□□□□□ -1.99
MRPL55Q7Z7F7 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC012618.3-205ENST00000637896 1496 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 SNORD65.1-201ENST00000390889 71 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AL035405.1-201ENST00000400795 710 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 NRBF2P2-201ENST00000413087 861 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 MTATP6P4-201ENST00000427725 675 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 PSMA6P3-201ENST00000428242 164 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 MRPL50P1-201ENST00000431951 384 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC093155.1-201ENST00000440164 826 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 VN1R25P-201ENST00000443385 738 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 VN1R10P-201ENST00000447106 875 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 HMGB3P8-201ENST00000449709 577 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC140076.1-201ENST00000449897 361 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 VN1R40P-201ENST00000455196 941 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC091179.1-201ENST00000461606 579 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 RPL21P8-201ENST00000465083 535 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 RPL7P9-201ENST00000468715 747 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC109327.1-201ENST00000471666 403 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC013356.1-201ENST00000489027 564 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC231760.1-201ENST00000498002 260 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC008958.1-201ENST00000511047 682 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC104417.1-201ENST00000523974 751 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC087897.1-201ENST00000550134 156 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC012417.1-201ENST00000582307 1039 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC245036.5-201ENST00000596330 847 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 RPL23AP92-201ENST00000603609 255 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AL591424.2-201ENST00000617023 128 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 RN7SL722P-201ENST00000617780 284 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 RN7SL565P-201ENST00000618246 284 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC090897.3-201ENST00000636973 1157 ntBASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
MRPL55Q7Z7F7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
MRPL55Q7Z7F7 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC2.6□□□□□ -1.99
MRPL55Q7Z7F7 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
MRPL55Q7Z7F7 API5P2-201ENST00000397055 1498 ntBASIC2.6□□□□□ -1.99
MRPL55Q7Z7F7 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
MRPL55Q7Z7F7 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
MRPL55Q7Z7F7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
MRPL55Q7Z7F7 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
MRPL55Q7Z7F7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms