Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD4Q6ZW05 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD4Q6ZW05 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTCHD4Q6ZW05 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.33□□□□□ -1.72
PTCHD4Q6ZW05 AC018529.3-201ENST00000624212 2254 ntBASIC4.33□□□□□ -1.72
PTCHD4Q6ZW05 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC130650.2-201ENST00000618736 2403 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 RNU5A-6P-201ENST00000384136 116 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 SNORA70-201ENST00000384436 135 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 MIR124-3-201ENST00000384866 87 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AL031679.1-201ENST00000400616 525 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AL024474.1-201ENST00000404655 591 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 RPL7P57-201ENST00000423238 740 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 Z74021.1-201ENST00000423610 407 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 RSU1P2-202ENST00000437884 485 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 DNAJC19P4-201ENST00000440115 345 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC002381.1-201ENST00000447049 280 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 HIGD1AP8-201ENST00000453927 274 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 RPL23AP56-201ENST00000460778 453 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 HMGB1P36-201ENST00000487709 576 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 RPL7P24-201ENST00000493052 752 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC110792.2-201ENST00000510278 224 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC022832.1-201ENST00000530718 645 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 EEF1B2P4-201ENST00000551398 348 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC015912.2-201ENST00000571053 181 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC137800.2-201ENST00000574375 120 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 RN7SL802P-201ENST00000577858 299 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 MIR3691-201ENST00000578066 90 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC209154.1-201ENST00000582156 337 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC006116.3-201ENST00000592968 361 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC091979.2-201ENST00000607514 214 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AL158196.1-201ENST00000616786 434 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AC108479.2-201ENST00000617314 601 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 AL139089.1-201ENST00000620372 975 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 OR5AK4P-201ENST00000635912 903 ntBASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTCHD4Q6ZW05 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 ELL2P4-201ENST00000446870 1376 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 RNY4P24-201ENST00000362735 96 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 U8.4-201ENST00000363626 134 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 RNA5SP435-201ENST00000364044 108 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 RNU6-343P-201ENST00000364709 104 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 Z97832.1-201ENST00000402490 328 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 MIR548F1-201ENST00000408667 84 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 NUP35P2-201ENST00000416748 943 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 MTND1P23-201ENST00000416931 372 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 AC004690.1-201ENST00000418216 328 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 Z97055.1-201ENST00000419730 712 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 EIF1P1-201ENST00000421436 341 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 OR8F1P-201ENST00000425243 930 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 AC093414.1-201ENST00000434712 514 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 RPL7P11-201ENST00000437586 658 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 PRPF38AP2-201ENST00000438179 851 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 RPL7P36-201ENST00000444633 681 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 MTND1P1-201ENST00000445453 368 ntBASIC4.31□□□□□ -1.72
PTCHD4Q6ZW05 USP9YP34-201ENST00000453983 808 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms