Protein–RNA interactions for Protein: Q16518

RPE65, Retinoid isomerohydrolase, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPE65Q16518 AL592437.2-201ENST00000421655 2434 ntBASIC4.17□□□□□ -1.74
RPE65Q16518 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
RPE65Q16518 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.17□□□□□ -1.74
RPE65Q16518 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RPE65Q16518 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.17□□□□□ -1.74
RPE65Q16518 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
RPE65Q16518 GDI2P1-201ENST00000429312 1336 ntBASIC4.17□□□□□ -1.74
RPE65Q16518 ZNF833P-201ENST00000424938 1494 ntBASIC4.17□□□□□ -1.74
RPE65Q16518 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.17□□□□□ -1.74
RPE65Q16518 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
RPE65Q16518 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.16□□□□□ -1.74
RPE65Q16518 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
RPE65Q16518 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.16□□□□□ -1.74
RPE65Q16518 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPE65Q16518 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.16□□□□□ -1.74
RPE65Q16518 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.16□□□□□ -1.74
RPE65Q16518 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.16□□□□□ -1.74
RPE65Q16518 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
RPE65Q16518 RNU6-660P-201ENST00000364566 109 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.16□□□□□ -1.74
RPE65Q16518 RNU6-723P-201ENST00000383973 107 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 ENSAP1-201ENST00000392855 326 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 ARF4P3-201ENST00000397387 509 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 RPS3AP26-201ENST00000398259 784 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 HMGB1P17-201ENST00000403495 628 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.16□□□□□ -1.74
RPE65Q16518 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RPE65Q16518 HSFY4P-201ENST00000415994 1181 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 AC244035.1-201ENST00000430042 390 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.16□□□□□ -1.74
RPE65Q16518 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.16□□□□□ -1.74
RPE65Q16518 AL831737.1-201ENST00000441288 271 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.16□□□□□ -1.74
RPE65Q16518 ZNF114P1-201ENST00000453500 292 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.16□□□□□ -1.74
RPE65Q16518 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.16□□□□□ -1.74
RPE65Q16518 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RPE65Q16518 AC108941.1-201ENST00000502853 530 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC4.16□□□□□ -1.74
RPE65Q16518 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC4.16□□□□□ -1.74
RPE65Q16518 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.16□□□□□ -1.74
RPE65Q16518 STMN1P2-201ENST00000508435 439 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.16□□□□□ -1.74
RPE65Q16518 MRPL49P2-201ENST00000521066 465 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.16□□□□□ -1.74
RPE65Q16518 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC4.16□□□□□ -1.74
RPE65Q16518 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
RPE65Q16518 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.16□□□□□ -1.74
RPE65Q16518 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.16□□□□□ -1.74
RPE65Q16518 AC006064.5-201ENST00000541782 248 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.16□□□□□ -1.74
RPE65Q16518 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.16□□□□□ -1.74
RPE65Q16518 HNRNPCP4-201ENST00000571636 900 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 LARP7P2-201ENST00000575306 125 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.16□□□□□ -1.74
RPE65Q16518 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.16□□□□□ -1.74
RPE65Q16518 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.16□□□□□ -1.74
RPE65Q16518 AC092653.1-201ENST00000608509 531 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 AC084782.3-201ENST00000612282 578 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 AL138721.1-201ENST00000616756 179 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.16□□□□□ -1.74
RPE65Q16518 MIR4496-201ENST00000635896 61 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 AC008013.2-202ENST00000637965 364 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPE65Q16518 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPE65Q16518 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RPE65Q16518 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.16□□□□□ -1.74
RPE65Q16518 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
RPE65Q16518 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPE65Q16518 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
RPE65Q16518 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RPE65Q16518 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPE65Q16518 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.16□□□□□ -1.74
RPE65Q16518 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
RPE65Q16518 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RPE65Q16518 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
RPE65Q16518 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RPE65Q16518 LARP1BP1-201ENST00000506036 1359 ntBASIC4.15□□□□□ -1.74
RPE65Q16518 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
RPE65Q16518 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.74
RPE65Q16518 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.15□□□□□ -1.75
RPE65Q16518 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
RPE65Q16518 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
RPE65Q16518 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
RPE65Q16518 RNA5SP372-201ENST00000390836 115 ntBASIC4.15□□□□□ -1.75
RPE65Q16518 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
RPE65Q16518 HDGFP1-201ENST00000405943 252 ntBASIC4.15□□□□□ -1.75
RPE65Q16518 TPMTP3-201ENST00000411928 735 ntBASIC4.15□□□□□ -1.75
RPE65Q16518 RPL7P8-201ENST00000411964 730 ntBASIC4.15□□□□□ -1.75
RPE65Q16518 RPL31P2-201ENST00000413849 377 ntBASIC4.15□□□□□ -1.75
RPE65Q16518 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.15□□□□□ -1.75
RPE65Q16518 NPM1P11-201ENST00000417106 855 ntBASIC4.15□□□□□ -1.75
RPE65Q16518 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC4.15□□□□□ -1.75
RPE65Q16518 AC016907.1-201ENST00000419483 435 ntBASIC4.15□□□□□ -1.75
RPE65Q16518 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.15□□□□□ -1.75
RPE65Q16518 PSMA2P3-201ENST00000429685 675 ntBASIC4.15□□□□□ -1.75
RPE65Q16518 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.15□□□□□ -1.75
RPE65Q16518 BTF3P10-201ENST00000433415 495 ntBASIC4.15□□□□□ -1.75
RPE65Q16518 KCTD10P1-201ENST00000434203 625 ntBASIC4.15□□□□□ -1.75
RPE65Q16518 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms