Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 AC026741.1-201ENST00000605892 482 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 STMN1P1-201ENST00000617809 440 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 AC024595.1-201ENST00000623088 387 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 AC048347.1-201ENST00000624621 427 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 AC004972.1-201ENST00000623934 2209 ntBASIC3.19□□□□□ -1.9
HMGCS1Q01581 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.19□□□□□ -1.9
HMGCS1Q01581 AL356274.2-201ENST00000624379 3752 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGCS1Q01581 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGCS1Q01581 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGCS1Q01581 RPL7P26-201ENST00000333817 754 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 RNU6-609P-201ENST00000365459 107 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 NFIB-202ENST00000380924 840 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 RNA5SP171-201ENST00000391071 115 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 BX323014.1-201ENST00000412876 237 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC245052.5-201ENST00000416320 649 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC073310.1-201ENST00000423226 1033 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 ISCA1P2-201ENST00000438679 421 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 TXNP1-201ENST00000441872 371 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 RPS26P30-201ENST00000443431 335 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 AL035407.2-201ENST00000454090 378 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC073522.1-201ENST00000483312 377 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 TMEM248P1-201ENST00000510579 951 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC121161.1-201ENST00000510606 652 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 SCARNA20.6-201ENST00000517251 106 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC008562.1-201ENST00000521763 330 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 OR4R2P-201ENST00000530815 597 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 PDCL2P2-201ENST00000533651 189 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HMGCS1Q01581 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 CCNG2P1-201ENST00000549521 1000 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC074029.1-201ENST00000552531 1044 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC022146.1-201ENST00000595307 847 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC125494.3-201ENST00000602759 455 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 NTAN1P1-201ENST00000603150 646 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 uc_338.1-201ENST00000612113 180 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 SNORD39.4-201ENST00000620099 78 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 AL356321.1-201ENST00000621360 228 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 AL590396.2-201ENST00000636511 1041 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGCS1Q01581 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HMGCS1Q01581 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 AC005183.1-201ENST00000603687 1979 ntBASIC3.18□□□□□ -1.9
HMGCS1Q01581 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
HMGCS1Q01581 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGCS1Q01581 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HMGCS1Q01581 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HMGCS1Q01581 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HMGCS1Q01581 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 SNORD56.3-201ENST00000363507 71 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HMGCS1Q01581 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 AC234772.1-201ENST00000377927 937 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 RNU6-1293P-201ENST00000384077 107 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 RNA5SP44-201ENST00000410446 133 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 AC092745.2-202ENST00000411880 369 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HMGCS1Q01581 HSFY4P-201ENST00000415994 1181 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 AC008173.1-201ENST00000418901 264 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 PSMA2P3-201ENST00000429685 675 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 CST9LP2-201ENST00000437612 320 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 RPL6P5-201ENST00000445678 828 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 BX276092.4-201ENST00000452056 248 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 MRPL35P4-201ENST00000453682 566 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 RN7SL293P-201ENST00000481765 281 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 MTCO2P9-201ENST00000503214 694 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.17□□□□□ -1.9
HMGCS1Q01581 APOOP4-201ENST00000513530 597 ntBASIC3.17□□□□□ -1.9
HMGCS1Q01581 RNU6-334P-201ENST00000517072 102 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms