Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 NPM1P13-201ENST00000452663 865 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC007967.1-201ENST00000455422 1159 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 RN7SL601P-201ENST00000471221 293 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 HSPD1P15-201ENST00000505573 1122 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 RNU6-885P-201ENST00000516607 104 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 RNU6-1028P-201ENST00000517164 93 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 IGLVIV-53-201ENST00000520107 367 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 NDUFS5P6-201ENST00000529136 295 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 OR4C2P-201ENST00000530855 1064 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 MIR5186-201ENST00000577504 120 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 BNIP3P40-201ENST00000596017 556 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AP003973.1-201ENST00000604639 691 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC006077.1-201ENST00000604746 343 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AL583856.2-201ENST00000606298 543 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 AL732618.1-201ENST00000623251 301 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC013437.2-201ENST00000639587 677 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TNFRSF4P43489 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC117529.2-201ENST00000512159 2068 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 HMGB1P5-201ENST00000255320 642 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 XIAPP3-201ENST00000312918 795 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 RNU6-582P-201ENST00000362989 107 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 RNU1-33P-201ENST00000364249 162 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 SNORD116-23-201ENST00000384645 92 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AL603766.1-201ENST00000407763 664 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 USP9YP21-201ENST00000420603 432 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 HSFY1P1-201ENST00000423928 1178 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 MRPL42P4-201ENST00000453267 443 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AP000873.1-201ENST00000463987 400 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 TPT1P8-201ENST00000510120 555 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 RN7SKP209-201ENST00000516888 304 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 ARL2BPP5-201ENST00000523141 481 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 OR4A45P-201ENST00000529954 901 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 LSM6P2-201ENST00000552208 177 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC093519.1-201ENST00000566109 298 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 MIR3200-201ENST00000580767 85 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AL160281.1-201ENST00000605307 311 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AL512506.2-201ENST00000624472 458 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC010608.3-201ENST00000625048 527 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC099654.9-201ENST00000637055 678 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
TNFRSF4P43489 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TNFRSF4P43489 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
TNFRSF4P43489 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.65□□□□□ -1.83
TNFRSF4P43489 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TNFRSF4P43489 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.65□□□□□ -1.83
TNFRSF4P43489 MTHFD2P2-201ENST00000407725 247 ntBASIC3.65□□□□□ -1.83
TNFRSF4P43489 RPS7P9-201ENST00000414704 586 ntBASIC3.65□□□□□ -1.83
TNFRSF4P43489 HMGB3P20-201ENST00000417997 600 ntBASIC3.65□□□□□ -1.83
TNFRSF4P43489 AC091390.3-201ENST00000426478 338 ntBASIC3.65□□□□□ -1.83
TNFRSF4P43489 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.65□□□□□ -1.83
TNFRSF4P43489 AC005019.1-201ENST00000436455 431 ntBASIC3.65□□□□□ -1.83
TNFRSF4P43489 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.65□□□□□ -1.83
TNFRSF4P43489 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.65□□□□□ -1.83
TNFRSF4P43489 SNRPGP5-201ENST00000456003 220 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms