Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 NPM1P13-201ENST00000452663 865 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC007967.1-201ENST00000455422 1159 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 RN7SL601P-201ENST00000471221 293 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 HSPD1P15-201ENST00000505573 1122 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 RNU6-885P-201ENST00000516607 104 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 RNU6-1028P-201ENST00000517164 93 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 IGLVIV-53-201ENST00000520107 367 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 NDUFS5P6-201ENST00000529136 295 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 OR4C2P-201ENST00000530855 1064 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 MIR5186-201ENST00000577504 120 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 BNIP3P40-201ENST00000596017 556 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AP003973.1-201ENST00000604639 691 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC006077.1-201ENST00000604746 343 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AL583856.2-201ENST00000606298 543 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 AL732618.1-201ENST00000623251 301 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 AC013437.2-201ENST00000639587 677 ntBASIC3.67□□□□□ -1.82
TNFRSF4P43489 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
TNFRSF4P43489 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
TNFRSF4P43489 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC117529.2-201ENST00000512159 2068 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 HMGB1P5-201ENST00000255320 642 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 XIAPP3-201ENST00000312918 795 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 RNU6-582P-201ENST00000362989 107 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 RNU1-33P-201ENST00000364249 162 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 SNORD116-23-201ENST00000384645 92 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AL603766.1-201ENST00000407763 664 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 USP9YP21-201ENST00000420603 432 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 OFD1P2Y-201ENST00000421895 1149 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 HSFY1P1-201ENST00000423928 1178 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 MRPL42P4-201ENST00000453267 443 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AP000873.1-201ENST00000463987 400 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 TPT1P8-201ENST00000510120 555 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 RN7SKP209-201ENST00000516888 304 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 ARL2BPP5-201ENST00000523141 481 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 OR4A45P-201ENST00000529954 901 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 LSM6P2-201ENST00000552208 177 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC093519.1-201ENST00000566109 298 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 MIR3200-201ENST00000580767 85 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AL160281.1-201ENST00000605307 311 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AL512506.2-201ENST00000624472 458 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC010608.3-201ENST00000625048 527 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AC099654.9-201ENST00000637055 678 ntBASIC3.66□□□□□ -1.82
TNFRSF4P43489 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
TNFRSF4P43489 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
TNFRSF4P43489 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
TNFRSF4P43489 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.65□□□□□ -1.82
TNFRSF4P43489 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.65□□□□□ -1.83
TNFRSF4P43489 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TNFRSF4P43489 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.65□□□□□ -1.83
TNFRSF4P43489 MTHFD2P2-201ENST00000407725 247 ntBASIC3.65□□□□□ -1.83
TNFRSF4P43489 RPS7P9-201ENST00000414704 586 ntBASIC3.65□□□□□ -1.83
TNFRSF4P43489 HMGB3P20-201ENST00000417997 600 ntBASIC3.65□□□□□ -1.83
TNFRSF4P43489 AC091390.3-201ENST00000426478 338 ntBASIC3.65□□□□□ -1.83
TNFRSF4P43489 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.65□□□□□ -1.83
TNFRSF4P43489 AC005019.1-201ENST00000436455 431 ntBASIC3.65□□□□□ -1.83
TNFRSF4P43489 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.65□□□□□ -1.83
TNFRSF4P43489 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.65□□□□□ -1.83
TNFRSF4P43489 SNRPGP5-201ENST00000456003 220 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms