Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MIR26A1-201ENST00000362205 77 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 MIR181A2-201ENST00000384863 110 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
COL4A5P29400 SNORA79B-201ENST00000410557 148 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 AL590103.1-201ENST00000434488 307 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 AP000936.3-201ENST00000438127 255 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 AC078785.3-201ENST00000476607 425 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.17□□□□□ -1.9
COL4A5P29400 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
COL4A5P29400 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC3.17□□□□□ -1.9
COL4A5P29400 AP000919.1-202ENST00000581139 1264 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 AC015911.5-201ENST00000587076 451 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 AC025811.1-201ENST00000604312 472 ntBASIC3.17□□□□□ -1.9
COL4A5P29400 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.17□□□□□ -1.9
COL4A5P29400 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL4A5P29400 AP000526.1-201ENST00000603308 1388 ntBASIC3.16□□□□□ -1.9
COL4A5P29400 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL4A5P29400 AC092079.1-201ENST00000558620 1985 ntBASIC3.16□□□□□ -1.9
COL4A5P29400 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC3.16□□□□□ -1.9
COL4A5P29400 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL4A5P29400 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
COL4A5P29400 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.16□□□□□ -1.9
COL4A5P29400 RPL31P1-201ENST00000398116 372 ntBASIC3.16□□□□□ -1.9
COL4A5P29400 RNA5SP296-201ENST00000410523 111 ntBASIC3.16□□□□□ -1.9
COL4A5P29400 OR51A3P-201ENST00000413596 924 ntBASIC3.16□□□□□ -1.9
COL4A5P29400 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.16□□□□□ -1.9
COL4A5P29400 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL4A5P29400 AL121877.1-201ENST00000453704 622 ntBASIC3.16□□□□□ -1.9
COL4A5P29400 AC005921.1-201ENST00000510589 286 ntBASIC3.16□□□□□ -1.9
COL4A5P29400 HPRT1P3-201ENST00000539521 576 ntBASIC3.16□□□□□ -1.9
COL4A5P29400 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC3.16□□□□□ -1.9
COL4A5P29400 MIR4635-201ENST00000583759 79 ntBASIC3.16□□□□□ -1.9
COL4A5P29400 AC005046.1-201ENST00000608515 625 ntBASIC3.16□□□□□ -1.9
COL4A5P29400 AL451049.1-201ENST00000608672 497 ntBASIC3.16□□□□□ -1.9
COL4A5P29400 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
COL4A5P29400 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
COL4A5P29400 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
COL4A5P29400 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.16□□□□□ -1.9
COL4A5P29400 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC3.15□□□□□ -1.9
COL4A5P29400 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
COL4A5P29400 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
COL4A5P29400 AC134882.1-201ENST00000603738 1676 ntBASIC3.15□□□□□ -1.9
COL4A5P29400 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
COL4A5P29400 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC3.15□□□□□ -1.9
COL4A5P29400 RNU4-53P-201ENST00000410828 140 ntBASIC3.15□□□□□ -1.9
COL4A5P29400 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.15□□□□□ -1.9
COL4A5P29400 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
COL4A5P29400 RPS12P5-201ENST00000423449 371 ntBASIC3.15□□□□□ -1.9
COL4A5P29400 FCF1P1-201ENST00000432690 571 ntBASIC3.15□□□□□ -1.9
COL4A5P29400 AC006539.3-201ENST00000454258 129 ntBASIC3.15□□□□□ -1.9
COL4A5P29400 AL391156.1-201ENST00000554965 554 ntBASIC3.15□□□□□ -1.9
COL4A5P29400 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
COL4A5P29400 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
COL4A5P29400 MTND5P23-201ENST00000430812 1655 ntBASIC3.15□□□□□ -1.91
COL4A5P29400 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL4A5P29400 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.14□□□□□ -1.91
COL4A5P29400 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.14□□□□□ -1.91
COL4A5P29400 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC3.14□□□□□ -1.91
COL4A5P29400 RPL23AP22-201ENST00000437556 453 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.14□□□□□ -1.91
COL4A5P29400 RN7SKP43-201ENST00000516173 320 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 DEFB122-202ENST00000569013 197 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 AC022069.1-201ENST00000582910 658 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 AC010620.2-201ENST00000600135 313 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
COL4A5P29400 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
COL4A5P29400 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.14□□□□□ -1.91
COL4A5P29400 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL4A5P29400 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
COL4A5P29400 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
COL4A5P29400 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
COL4A5P29400 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
COL4A5P29400 RNU6-249P-201ENST00000363016 102 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 RNU6-618P-201ENST00000363518 112 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 AL079342.1-201ENST00000401460 267 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 CYCSP45-201ENST00000402289 315 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 AC002524.1-201ENST00000411687 547 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
COL4A5P29400 AL031736.2-201ENST00000426573 787 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.14□□□□□ -1.91
COL4A5P29400 AL365396.1-201ENST00000430854 671 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 HMGN2P3-201ENST00000433603 273 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
COL4A5P29400 HMGN2P5-201ENST00000436882 273 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.14□□□□□ -1.91
COL4A5P29400 AL591623.2-201ENST00000449978 222 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 RN7SL75P-201ENST00000461926 281 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 CYCSP20-201ENST00000473154 315 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 RN7SL442P-201ENST00000473804 320 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.14□□□□□ -1.91
COL4A5P29400 AP002770.2-201ENST00000543613 532 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 AC090115.4-201ENST00000609970 188 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 AL354950.1-201ENST00000614150 568 ntBASIC3.14□□□□□ -1.91
COL4A5P29400 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC3.14□□□□□ -1.91
COL4A5P29400 AP006437.1-201ENST00000641440 3685 ntBASIC3.13□□□□□ -1.91
COL4A5P29400 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
COL4A5P29400 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC3.13□□□□□ -1.91
COL4A5P29400 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.13□□□□□ -1.91
COL4A5P29400 Y_RNA.226-201ENST00000364337 114 ntBASIC3.13□□□□□ -1.91
COL4A5P29400 RNU6-482P-201ENST00000391068 107 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 150.2 ms