Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.05□□□□□ -1.76
PTPRMP28827 RNVU1-3-201ENST00000364313 161 ntBASIC4.05□□□□□ -1.76
PTPRMP28827 AL009174.1-201ENST00000426577 416 ntBASIC4.05□□□□□ -1.76
PTPRMP28827 AP000936.3-201ENST00000438127 255 ntBASIC4.05□□□□□ -1.76
PTPRMP28827 HMGB3P6-201ENST00000444896 598 ntBASIC4.05□□□□□ -1.76
PTPRMP28827 AL353705.4-201ENST00000449661 238 ntBASIC4.05□□□□□ -1.76
PTPRMP28827 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC4.05□□□□□ -1.76
PTPRMP28827 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC4.05□□□□□ -1.76
PTPRMP28827 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPRMP28827 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTPRMP28827 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPRMP28827 IGKV2-36-201ENST00000519999 223 ntBASIC4.05□□□□□ -1.76
PTPRMP28827 IGLVIV-53-201ENST00000520107 367 ntBASIC4.05□□□□□ -1.76
PTPRMP28827 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPRMP28827 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPRMP28827 AL353684.1-201ENST00000622677 1120 ntBASIC4.05□□□□□ -1.76
PTPRMP28827 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPRMP28827 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PTPRMP28827 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PTPRMP28827 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PTPRMP28827 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PTPRMP28827 SNORD56.3-201ENST00000363507 71 ntBASIC4.05□□□□□ -1.76
PTPRMP28827 RPS7P13-201ENST00000413955 498 ntBASIC4.05□□□□□ -1.76
PTPRMP28827 AL137014.1-201ENST00000420490 1226 ntBASIC4.05□□□□□ -1.76
PTPRMP28827 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPRMP28827 AL162389.1-201ENST00000449233 177 ntBASIC4.05□□□□□ -1.76
PTPRMP28827 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.05□□□□□ -1.76
PTPRMP28827 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.05□□□□□ -1.76
PTPRMP28827 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.04□□□□□ -1.76
PTPRMP28827 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPRMP28827 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTPRMP28827 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PTPRMP28827 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPRMP28827 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPRMP28827 ELL2P4-201ENST00000446870 1376 ntBASIC4.04□□□□□ -1.76
PTPRMP28827 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTPRMP28827 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PTPRMP28827 RPL21P132-201ENST00000331267 462 ntBASIC4.04□□□□□ -1.76
PTPRMP28827 SKINT1L-201ENST00000401057 817 ntBASIC4.04□□□□□ -1.76
PTPRMP28827 AC006960.1-201ENST00000419980 153 ntBASIC4.04□□□□□ -1.76
PTPRMP28827 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC4.04□□□□□ -1.76
PTPRMP28827 AL356320.1-201ENST00000429616 163 ntBASIC4.04□□□□□ -1.76
PTPRMP28827 RN7SL330P-201ENST00000469709 307 ntBASIC4.04□□□□□ -1.76
PTPRMP28827 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PTPRMP28827 AP000867.2-201ENST00000532468 320 ntBASIC4.04□□□□□ -1.76
PTPRMP28827 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.04□□□□□ -1.76
PTPRMP28827 AC022069.1-201ENST00000582910 658 ntBASIC4.04□□□□□ -1.76
PTPRMP28827 AC007621.1-201ENST00000604544 437 ntBASIC4.04□□□□□ -1.76
PTPRMP28827 AL591516.1-201ENST00000611326 274 ntBASIC4.04□□□□□ -1.76
PTPRMP28827 AL356490.1-201ENST00000623079 479 ntBASIC4.04□□□□□ -1.76
PTPRMP28827 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.04□□□□□ -1.76
PTPRMP28827 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PTPRMP28827 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
PTPRMP28827 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPRMP28827 RPS12P23-201ENST00000419579 400 ntBASIC4.03□□□□□ -1.76
PTPRMP28827 FGF7P3-201ENST00000454645 303 ntBASIC4.03□□□□□ -1.76
PTPRMP28827 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPRMP28827 RPL23AP70-201ENST00000483361 460 ntBASIC4.03□□□□□ -1.76
PTPRMP28827 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
PTPRMP28827 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.03□□□□□ -1.76
PTPRMP28827 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC4.03□□□□□ -1.76
PTPRMP28827 AC009063.1-201ENST00000563342 702 ntBASIC4.03□□□□□ -1.76
PTPRMP28827 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.03□□□□□ -1.76
PTPRMP28827 AP000942.3-201ENST00000603702 160 ntBASIC4.03□□□□□ -1.76
PTPRMP28827 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.77
PTPRMP28827 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPRMP28827 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPRMP28827 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC4.02□□□□□ -1.77
PTPRMP28827 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPRMP28827 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
PTPRMP28827 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
PTPRMP28827 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPRMP28827 AC008280.2-201ENST00000455473 307 ntBASIC4.02□□□□□ -1.77
PTPRMP28827 AC090281.1-201ENST00000523019 276 ntBASIC4.02□□□□□ -1.77
PTPRMP28827 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC4.02□□□□□ -1.77
PTPRMP28827 OR4K7P-201ENST00000580232 945 ntBASIC4.02□□□□□ -1.77
PTPRMP28827 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
PTPRMP28827 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
PTPRMP28827 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC4.02□□□□□ -1.77
PTPRMP28827 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPRMP28827 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC4.02□□□□□ -1.77
PTPRMP28827 AC006020.1-201ENST00000420179 1854 ntBASIC4.01□□□□□ -1.77
PTPRMP28827 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPRMP28827 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
PTPRMP28827 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPRMP28827 OR2AS1P-201ENST00000427827 319 ntBASIC4.01□□□□□ -1.77
PTPRMP28827 AC006539.3-201ENST00000454258 129 ntBASIC4.01□□□□□ -1.77
PTPRMP28827 AL590639.1-201ENST00000456484 337 ntBASIC4.01□□□□□ -1.77
PTPRMP28827 AC004801.2-202ENST00000463559 283 ntBASIC4.01□□□□□ -1.77
PTPRMP28827 AC105918.1-201ENST00000474399 838 ntBASIC4.01□□□□□ -1.77
PTPRMP28827 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPRMP28827 RNA5SP320-201ENST00000516263 124 ntBASIC4.01□□□□□ -1.77
PTPRMP28827 RNA5SP282-201ENST00000516355 108 ntBASIC4.01□□□□□ -1.77
PTPRMP28827 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.01□□□□□ -1.77
PTPRMP28827 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PTPRMP28827 RANP3-201ENST00000530970 276 ntBASIC4.01□□□□□ -1.77
PTPRMP28827 MIR4498-201ENST00000577599 66 ntBASIC4.01□□□□□ -1.77
PTPRMP28827 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPRMP28827 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPRMP28827 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms