Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
LMO1P25800 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LMO1P25800 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.28□□□□□ -1.72
LMO1P25800 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.28□□□□□ -1.72
LMO1P25800 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LMO1P25800 AC008079.2-201ENST00000623543 20396 ntBASIC4.28□□□□□ -1.72
LMO1P25800 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
LMO1P25800 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.28□□□□□ -1.72
LMO1P25800 PABPC1P6-201ENST00000445594 1829 ntBASIC4.28□□□□□ -1.72
LMO1P25800 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.27□□□□□ -1.73
LMO1P25800 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.27□□□□□ -1.73
LMO1P25800 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
LMO1P25800 AC119744.1-201ENST00000454746 1715 ntBASIC4.27□□□□□ -1.73
LMO1P25800 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.27□□□□□ -1.73
LMO1P25800 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
LMO1P25800 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
LMO1P25800 RNU6-621P-201ENST00000364752 109 ntBASIC4.27□□□□□ -1.73
LMO1P25800 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 RNU6-43P-201ENST00000384302 107 ntBASIC4.27□□□□□ -1.73
LMO1P25800 RNU6-1222P-201ENST00000384615 107 ntBASIC4.27□□□□□ -1.73
LMO1P25800 SNORD65.1-201ENST00000390889 71 ntBASIC4.27□□□□□ -1.73
LMO1P25800 SNORA40.3-201ENST00000390964 122 ntBASIC4.27□□□□□ -1.73
LMO1P25800 GSTA9P-201ENST00000406231 611 ntBASIC4.27□□□□□ -1.73
LMO1P25800 RNU6-1148P-201ENST00000410992 104 ntBASIC4.27□□□□□ -1.73
LMO1P25800 RPS15AP38-201ENST00000413110 372 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.27□□□□□ -1.73
LMO1P25800 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.27□□□□□ -1.73
LMO1P25800 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.27□□□□□ -1.73
LMO1P25800 TIMM9P3-201ENST00000428659 274 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.27□□□□□ -1.73
LMO1P25800 SNRPEP4-201ENST00000435815 279 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.27□□□□□ -1.73
LMO1P25800 CEACAMP7-201ENST00000444105 496 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.27□□□□□ -1.73
LMO1P25800 CECR9-201ENST00000453421 199 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AC091180.1-201ENST00000462104 372 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AP000942.1-201ENST00000463969 747 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.27□□□□□ -1.73
LMO1P25800 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.27□□□□□ -1.73
LMO1P25800 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.27□□□□□ -1.73
LMO1P25800 ATP1B1P1-201ENST00000509767 915 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AC114797.1-201ENST00000514003 728 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AC087808.1-201ENST00000520501 361 ntBASIC4.27□□□□□ -1.73
LMO1P25800 RPL23AP53-201ENST00000521854 457 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AP000859.1-201ENST00000525536 307 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.27□□□□□ -1.73
LMO1P25800 AP003122.4-201ENST00000530980 758 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.27□□□□□ -1.73
LMO1P25800 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.27□□□□□ -1.73
LMO1P25800 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.27□□□□□ -1.73
LMO1P25800 AL512360.1-201ENST00000555346 234 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AC025678.1-201ENST00000567861 338 ntBASIC4.27□□□□□ -1.73
LMO1P25800 MIR4307-201ENST00000582802 84 ntBASIC4.27□□□□□ -1.73
LMO1P25800 RPL12P25-202ENST00000598100 674 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AC113139.1-201ENST00000605049 239 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AL136363.1-201ENST00000605349 337 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AC009268.2-201ENST00000621925 457 ntBASIC4.27□□□□□ -1.73
LMO1P25800 AC091905.1-201ENST00000624400 311 ntBASIC4.27□□□□□ -1.73
LMO1P25800 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LMO1P25800 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 AC011493.1-201ENST00000596753 1632 ntBASIC4.27□□□□□ -1.73
LMO1P25800 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.27□□□□□ -1.73
LMO1P25800 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
LMO1P25800 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
LMO1P25800 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.27□□□□□ -1.73
LMO1P25800 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.27□□□□□ -1.73
LMO1P25800 MTND5P27-201ENST00000428871 1720 ntBASIC4.26□□□□□ -1.73
LMO1P25800 AC126323.6-202ENST00000568092 3511 ntBASIC4.26□□□□□ -1.73
LMO1P25800 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO1P25800 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.26□□□□□ -1.73
LMO1P25800 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO1P25800 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
LMO1P25800 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO1P25800 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO1P25800 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LMO1P25800 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO1P25800 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.26□□□□□ -1.73
LMO1P25800 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.26□□□□□ -1.73
LMO1P25800 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LMO1P25800 AL512646.1-201ENST00000269395 1077 ntBASIC4.26□□□□□ -1.73
LMO1P25800 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LMO1P25800 OR52B1P-201ENST00000316506 909 ntBASIC4.26□□□□□ -1.73
LMO1P25800 Y_RNA.18-201ENST00000362461 102 ntBASIC4.26□□□□□ -1.73
LMO1P25800 Y_RNA.31-201ENST00000362574 102 ntBASIC4.26□□□□□ -1.73
LMO1P25800 RNU6-451P-201ENST00000362921 107 ntBASIC4.26□□□□□ -1.73
LMO1P25800 RNU5F-6P-201ENST00000362979 116 ntBASIC4.26□□□□□ -1.73
LMO1P25800 SNORA4.1-201ENST00000364263 144 ntBASIC4.26□□□□□ -1.73
LMO1P25800 RNU1-43P-201ENST00000365052 165 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms