Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
APOBP04114 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
APOBP04114 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
APOBP04114 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
APOBP04114 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC1.65□□□□□ -2.14
APOBP04114 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC1.65□□□□□ -2.14
APOBP04114 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.65□□□□□ -2.14
APOBP04114 RMST_9.1-201ENST00000619945 193 ntBASIC1.65□□□□□ -2.14
APOBP04114 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC1.65□□□□□ -2.14
APOBP04114 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC1.65□□□□□ -2.14
APOBP04114 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
APOBP04114 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
APOBP04114 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC1.65□□□□□ -2.15
APOBP04114 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
APOBP04114 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
APOBP04114 RPL7P10-201ENST00000417407 739 ntBASIC1.65□□□□□ -2.15
APOBP04114 PTP4A1P5-201ENST00000420305 455 ntBASIC1.65□□□□□ -2.15
APOBP04114 GTF2IP23-201ENST00000423746 351 ntBASIC1.65□□□□□ -2.15
APOBP04114 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.65□□□□□ -2.15
APOBP04114 HMGB3P8-201ENST00000449709 577 ntBASIC1.65□□□□□ -2.15
APOBP04114 VWA8P1-201ENST00000510889 176 ntBASIC1.65□□□□□ -2.15
APOBP04114 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
APOBP04114 SNORA31.1-201ENST00000515993 133 ntBASIC1.65□□□□□ -2.15
APOBP04114 SNORA31.5-201ENST00000516190 133 ntBASIC1.65□□□□□ -2.15
APOBP04114 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC1.65□□□□□ -2.15
APOBP04114 OR11H5P-201ENST00000554039 926 ntBASIC1.65□□□□□ -2.15
APOBP04114 HMGN2P47-201ENST00000559378 272 ntBASIC1.65□□□□□ -2.15
APOBP04114 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.65□□□□□ -2.15
APOBP04114 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC1.65□□□□□ -2.15
APOBP04114 AC007423.1-201ENST00000605009 627 ntBASIC1.65□□□□□ -2.15
APOBP04114 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.65□□□□□ -2.15
APOBP04114 NF1P10-201ENST00000613227 742 ntBASIC1.65□□□□□ -2.15
APOBP04114 AC008121.2-201ENST00000614647 523 ntBASIC1.65□□□□□ -2.15
APOBP04114 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC1.65□□□□□ -2.15
APOBP04114 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.15
APOBP04114 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC1.65□□□□□ -2.15
APOBP04114 Y_RNA.40-201ENST00000362645 93 ntBASIC1.65□□□□□ -2.15
APOBP04114 BTF3P7-201ENST00000407097 488 ntBASIC1.65□□□□□ -2.15
APOBP04114 AC096638.1-201ENST00000444678 216 ntBASIC1.65□□□□□ -2.15
APOBP04114 AC006539.3-201ENST00000454258 129 ntBASIC1.65□□□□□ -2.15
APOBP04114 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC1.65□□□□□ -2.15
APOBP04114 RPL21P41-201ENST00000459863 264 ntBASIC1.65□□□□□ -2.15
APOBP04114 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC1.65□□□□□ -2.15
APOBP04114 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC1.65□□□□□ -2.15
APOBP04114 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.65□□□□□ -2.15
APOBP04114 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC1.65□□□□□ -2.15
APOBP04114 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.65□□□□□ -2.15
APOBP04114 AC015712.3-201ENST00000559380 164 ntBASIC1.65□□□□□ -2.15
APOBP04114 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.65□□□□□ -2.15
APOBP04114 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC1.65□□□□□ -2.15
APOBP04114 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC1.65□□□□□ -2.15
APOBP04114 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
APOBP04114 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
APOBP04114 AC092593.1-201ENST00000515413 1815 ntBASIC1.65□□□□□ -2.15
APOBP04114 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC1.65□□□□□ -2.15
APOBP04114 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
APOBP04114 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC1.64□□□□□ -2.15
APOBP04114 AP000936.3-201ENST00000438127 255 ntBASIC1.64□□□□□ -2.15
APOBP04114 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC1.64□□□□□ -2.15
APOBP04114 AL049840.6-202ENST00000603373 279 ntBASIC1.64□□□□□ -2.15
APOBP04114 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
APOBP04114 NSRP1P1-201ENST00000444067 1693 ntBASIC1.64□□□□□ -2.15
APOBP04114 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
APOBP04114 RANP7-201ENST00000418085 644 ntBASIC1.64□□□□□ -2.15
APOBP04114 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC1.64□□□□□ -2.15
APOBP04114 CYCSP20-201ENST00000473154 315 ntBASIC1.64□□□□□ -2.15
APOBP04114 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC1.64□□□□□ -2.15
APOBP04114 AC092628.2-201ENST00000622492 339 ntBASIC1.64□□□□□ -2.15
APOBP04114 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC1.64□□□□□ -2.15
APOBP04114 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
APOBP04114 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC1.64□□□□□ -2.15
APOBP04114 AC087565.3-202ENST00000642085 1603 ntBASIC1.64□□□□□ -2.15
APOBP04114 AC093010.3-201ENST00000570269 15214 ntBASIC1.64□□□□□ -2.15
APOBP04114 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
APOBP04114 Y_RNA.164-201ENST00000363709 102 ntBASIC1.64□□□□□ -2.15
APOBP04114 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
APOBP04114 RNU7-170P-201ENST00000459303 61 ntBASIC1.64□□□□□ -2.15
APOBP04114 SRIP1-201ENST00000489235 288 ntBASIC1.64□□□□□ -2.15
APOBP04114 RNU6-1231P-201ENST00000517185 103 ntBASIC1.64□□□□□ -2.15
APOBP04114 AC004696.1-201ENST00000614345 607 ntBASIC1.64□□□□□ -2.15
APOBP04114 AC103858.2-201ENST00000621471 543 ntBASIC1.64□□□□□ -2.15
APOBP04114 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
APOBP04114 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
APOBP04114 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC1.64□□□□□ -2.15
APOBP04114 RNU6-618P-201ENST00000363518 112 ntBASIC1.64□□□□□ -2.15
APOBP04114 RPL23AP48-201ENST00000406913 488 ntBASIC1.64□□□□□ -2.15
APOBP04114 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC1.64□□□□□ -2.15
APOBP04114 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
APOBP04114 AC245517.4-201ENST00000448601 281 ntBASIC1.64□□□□□ -2.15
APOBP04114 ENSA-210ENST00000503241 574 ntTSL 3 BASIC1.64□□□□□ -2.15
APOBP04114 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC1.64□□□□□ -2.15
APOBP04114 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.64□□□□□ -2.15
APOBP04114 PANCR-202ENST00000513690 448 ntTSL 2 BASIC1.64□□□□□ -2.15
APOBP04114 AC108471.1-201ENST00000513977 287 ntBASIC1.64□□□□□ -2.15
APOBP04114 RN7SKP272-201ENST00000516988 232 ntBASIC1.64□□□□□ -2.15
APOBP04114 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC1.64□□□□□ -2.15
APOBP04114 AL450489.1-201ENST00000612071 468 ntBASIC1.64□□□□□ -2.15
APOBP04114 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
APOBP04114 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
APOBP04114 TTC39DP-201ENST00000416781 1688 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms