Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
COL1A1P02452 ELF2P3-201ENST00000445099 1506 ntBASIC3.34□□□□□ -1.87
COL1A1P02452 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL1A1P02452 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
COL1A1P02452 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
COL1A1P02452 AC007342.7-201ENST00000624610 2337 ntBASIC3.34□□□□□ -1.88
COL1A1P02452 MIR365B-201ENST00000362317 111 ntBASIC3.34□□□□□ -1.88
COL1A1P02452 SNORA67.4-201ENST00000384688 142 ntBASIC3.34□□□□□ -1.88
COL1A1P02452 MIR181A2-201ENST00000384863 110 ntBASIC3.34□□□□□ -1.88
COL1A1P02452 MIR512-1-201ENST00000384913 84 ntBASIC3.34□□□□□ -1.88
COL1A1P02452 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.34□□□□□ -1.88
COL1A1P02452 AC013268.2-201ENST00000420753 337 ntBASIC3.34□□□□□ -1.88
COL1A1P02452 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.34□□□□□ -1.88
COL1A1P02452 MTCO1P51-201ENST00000427672 1060 ntBASIC3.34□□□□□ -1.88
COL1A1P02452 AC112220.1-201ENST00000434628 355 ntBASIC3.34□□□□□ -1.88
COL1A1P02452 RPS20P5-201ENST00000434808 360 ntBASIC3.34□□□□□ -1.88
COL1A1P02452 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC3.34□□□□□ -1.88
COL1A1P02452 AC099063.2-201ENST00000446360 662 ntBASIC3.34□□□□□ -1.88
COL1A1P02452 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.34□□□□□ -1.88
COL1A1P02452 AP004217.1-201ENST00000480579 346 ntBASIC3.34□□□□□ -1.88
COL1A1P02452 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC3.34□□□□□ -1.88
COL1A1P02452 HMGB3P26-201ENST00000560051 582 ntBASIC3.34□□□□□ -1.88
COL1A1P02452 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.34□□□□□ -1.88
COL1A1P02452 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.33□□□□□ -1.88
COL1A1P02452 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL1A1P02452 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL1A1P02452 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.33□□□□□ -1.88
COL1A1P02452 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
COL1A1P02452 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.33□□□□□ -1.88
COL1A1P02452 SNORA70B-201ENST00000384210 135 ntBASIC3.33□□□□□ -1.88
COL1A1P02452 HSPD1P16-201ENST00000402302 394 ntBASIC3.33□□□□□ -1.88
COL1A1P02452 RNA5SP508-201ENST00000411327 119 ntBASIC3.33□□□□□ -1.88
COL1A1P02452 BMS1P22-201ENST00000414726 313 ntBASIC3.33□□□□□ -1.88
COL1A1P02452 FTH1P6-201ENST00000430768 320 ntBASIC3.33□□□□□ -1.88
COL1A1P02452 AL513043.1-201ENST00000439124 535 ntBASIC3.33□□□□□ -1.88
COL1A1P02452 AC078817.1-201ENST00000492623 435 ntBASIC3.33□□□□□ -1.88
COL1A1P02452 NIPA2P2-201ENST00000496376 1083 ntBASIC3.33□□□□□ -1.88
COL1A1P02452 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.33□□□□□ -1.88
COL1A1P02452 MTCYBP19-201ENST00000517463 1124 ntBASIC3.33□□□□□ -1.88
COL1A1P02452 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.33□□□□□ -1.88
COL1A1P02452 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.33□□□□□ -1.88
COL1A1P02452 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC3.33□□□□□ -1.88
COL1A1P02452 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.33□□□□□ -1.88
COL1A1P02452 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.33□□□□□ -1.88
COL1A1P02452 AL139286.1-201ENST00000604465 483 ntBASIC3.33□□□□□ -1.88
COL1A1P02452 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
COL1A1P02452 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.33□□□□□ -1.88
COL1A1P02452 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL1A1P02452 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL1A1P02452 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.32□□□□□ -1.88
COL1A1P02452 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.32□□□□□ -1.88
COL1A1P02452 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.32□□□□□ -1.88
COL1A1P02452 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.32□□□□□ -1.88
COL1A1P02452 RN7SKP34-201ENST00000516142 244 ntBASIC3.32□□□□□ -1.88
COL1A1P02452 FAM60DP-201ENST00000524174 632 ntBASIC3.32□□□□□ -1.88
COL1A1P02452 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.32□□□□□ -1.88
COL1A1P02452 AL159169.2-201ENST00000610061 1269 ntBASIC3.32□□□□□ -1.88
COL1A1P02452 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.32□□□□□ -1.88
COL1A1P02452 AC016542.2-201ENST00000624201 619 ntBASIC3.32□□□□□ -1.88
COL1A1P02452 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL1A1P02452 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL1A1P02452 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
COL1A1P02452 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.31□□□□□ -1.88
COL1A1P02452 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
COL1A1P02452 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL1A1P02452 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL1A1P02452 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL1A1P02452 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL1A1P02452 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.31□□□□□ -1.88
COL1A1P02452 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC3.31□□□□□ -1.88
COL1A1P02452 RNU6-1263P-201ENST00000384601 106 ntBASIC3.31□□□□□ -1.88
COL1A1P02452 AL451074.5-201ENST00000415894 435 ntBASIC3.31□□□□□ -1.88
COL1A1P02452 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.31□□□□□ -1.88
COL1A1P02452 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.31□□□□□ -1.88
COL1A1P02452 SNORA31.21-201ENST00000517180 77 ntBASIC3.31□□□□□ -1.88
COL1A1P02452 RNA5SP380-201ENST00000517190 98 ntBASIC3.31□□□□□ -1.88
COL1A1P02452 PDCL2P2-201ENST00000533651 189 ntBASIC3.31□□□□□ -1.88
COL1A1P02452 AP002770.2-201ENST00000543613 532 ntBASIC3.31□□□□□ -1.88
COL1A1P02452 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.31□□□□□ -1.88
COL1A1P02452 AC023813.4-201ENST00000607580 580 ntBASIC3.31□□□□□ -1.88
COL1A1P02452 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL1A1P02452 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL1A1P02452 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
COL1A1P02452 RNA5SP247-201ENST00000411181 105 ntBASIC3.3□□□□□ -1.88
COL1A1P02452 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.3□□□□□ -1.88
COL1A1P02452 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.3□□□□□ -1.88
COL1A1P02452 AC104687.1-201ENST00000485829 412 ntBASIC3.3□□□□□ -1.88
COL1A1P02452 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.3□□□□□ -1.88
COL1A1P02452 MIR6817-201ENST00000615588 66 ntBASIC3.3□□□□□ -1.88
COL1A1P02452 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL1A1P02452 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL1A1P02452 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.3□□□□□ -1.88
COL1A1P02452 RNU6-984P-201ENST00000363236 109 ntBASIC3.29□□□□□ -1.88
COL1A1P02452 MIR504-201ENST00000385065 83 ntBASIC3.29□□□□□ -1.88
COL1A1P02452 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.29□□□□□ -1.88
COL1A1P02452 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.29□□□□□ -1.88
COL1A1P02452 MYL8P-204ENST00000431574 518 ntBASIC3.29□□□□□ -1.88
COL1A1P02452 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.29□□□□□ -1.88
COL1A1P02452 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.29□□□□□ -1.88
COL1A1P02452 RPS20P32-201ENST00000456044 356 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms