Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AC253576.2-201ENST00000618815 580 ntBASIC3.4□□□□□ -1.87
HCN1O60741 AC092184.1-201ENST00000625042 715 ntBASIC3.4□□□□□ -1.87
HCN1O60741 AL121594.5-201ENST00000631724 573 ntBASIC3.4□□□□□ -1.87
HCN1O60741 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
HCN1O60741 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
HCN1O60741 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
HCN1O60741 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
HCN1O60741 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.39□□□□□ -1.87
HCN1O60741 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
HCN1O60741 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.39□□□□□ -1.87
HCN1O60741 RNU6-283P-201ENST00000364788 107 ntBASIC3.39□□□□□ -1.87
HCN1O60741 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HCN1O60741 RNU6-1151P-201ENST00000384684 107 ntBASIC3.39□□□□□ -1.87
HCN1O60741 MIR7-3-201ENST00000384898 110 ntBASIC3.39□□□□□ -1.87
HCN1O60741 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.39□□□□□ -1.87
HCN1O60741 CRYBB2P1-203ENST00000415709 538 ntBASIC3.39□□□□□ -1.87
HCN1O60741 HMGB3P20-201ENST00000417997 600 ntBASIC3.39□□□□□ -1.87
HCN1O60741 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC3.39□□□□□ -1.87
HCN1O60741 AC006946.1-201ENST00000429106 328 ntBASIC3.39□□□□□ -1.87
HCN1O60741 NEK4P1-201ENST00000433383 879 ntBASIC3.39□□□□□ -1.87
HCN1O60741 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.39□□□□□ -1.87
HCN1O60741 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.39□□□□□ -1.87
HCN1O60741 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HCN1O60741 VN1R17P-201ENST00000472048 1090 ntBASIC3.39□□□□□ -1.87
HCN1O60741 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.39□□□□□ -1.87
HCN1O60741 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HCN1O60741 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
HCN1O60741 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.39□□□□□ -1.87
HCN1O60741 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC3.39□□□□□ -1.87
HCN1O60741 AC104115.2-201ENST00000523026 687 ntBASIC3.39□□□□□ -1.87
HCN1O60741 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.39□□□□□ -1.87
HCN1O60741 NIFKP8-201ENST00000560500 874 ntBASIC3.39□□□□□ -1.87
HCN1O60741 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.39□□□□□ -1.87
HCN1O60741 AC010735.1-201ENST00000567305 1026 ntBASIC3.39□□□□□ -1.87
HCN1O60741 MTCO1P40-201ENST00000574371 625 ntBASIC3.39□□□□□ -1.87
HCN1O60741 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.39□□□□□ -1.87
HCN1O60741 MIR3690-201ENST00000580266 75 ntBASIC3.39□□□□□ -1.87
HCN1O60741 AC017100.2-201ENST00000584628 355 ntBASIC3.39□□□□□ -1.87
HCN1O60741 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.39□□□□□ -1.87
HCN1O60741 AC006254.3-201ENST00000603353 884 ntBASIC3.39□□□□□ -1.87
HCN1O60741 RNU1-30P-201ENST00000606575 163 ntBASIC3.39□□□□□ -1.87
HCN1O60741 AC006023.2-201ENST00000609916 167 ntBASIC3.39□□□□□ -1.87
HCN1O60741 AP000943.4-201ENST00000622912 357 ntBASIC3.39□□□□□ -1.87
HCN1O60741 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.39□□□□□ -1.87
HCN1O60741 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
HCN1O60741 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.39□□□□□ -1.87
HCN1O60741 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
HCN1O60741 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
HCN1O60741 SNORA71.3-201ENST00000362582 128 ntBASIC3.38□□□□□ -1.87
HCN1O60741 RNA5SP295-201ENST00000362655 121 ntBASIC3.38□□□□□ -1.87
HCN1O60741 RNA5SP119-201ENST00000362715 117 ntBASIC3.38□□□□□ -1.87
HCN1O60741 RNU6-353P-201ENST00000364266 108 ntBASIC3.38□□□□□ -1.87
HCN1O60741 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.38□□□□□ -1.87
HCN1O60741 DSTNP4-201ENST00000399472 474 ntBASIC3.38□□□□□ -1.87
HCN1O60741 MTCO3P31-201ENST00000405526 789 ntBASIC3.38□□□□□ -1.87
HCN1O60741 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
HCN1O60741 SYF2P2-201ENST00000417620 583 ntBASIC3.38□□□□□ -1.87
HCN1O60741 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.38□□□□□ -1.87
HCN1O60741 RPS15AP6-201ENST00000420703 385 ntBASIC3.38□□□□□ -1.87
HCN1O60741 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.38□□□□□ -1.87
HCN1O60741 AC006989.1-201ENST00000427212 131 ntBASIC3.38□□□□□ -1.87
HCN1O60741 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.38□□□□□ -1.87
HCN1O60741 Z77249.1-201ENST00000444622 1175 ntBASIC3.38□□□□□ -1.87
HCN1O60741 AL050341.1-201ENST00000447743 313 ntBASIC3.38□□□□□ -1.87
HCN1O60741 RPS3AP46-201ENST00000448352 682 ntBASIC3.38□□□□□ -1.87
HCN1O60741 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.38□□□□□ -1.87
HCN1O60741 RPS15AP1-201ENST00000457423 391 ntBASIC3.38□□□□□ -1.87
HCN1O60741 NF1P3-201ENST00000457709 450 ntBASIC3.38□□□□□ -1.87
HCN1O60741 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.38□□□□□ -1.87
HCN1O60741 SNORD105B-201ENST00000458770 79 ntBASIC3.38□□□□□ -1.87
HCN1O60741 RPL21P104-201ENST00000464143 478 ntBASIC3.38□□□□□ -1.87
HCN1O60741 RPL6P9-201ENST00000466502 859 ntBASIC3.38□□□□□ -1.87
HCN1O60741 AP000893.1-201ENST00000474462 794 ntBASIC3.38□□□□□ -1.87
HCN1O60741 AC016550.1-201ENST00000505348 785 ntBASIC3.38□□□□□ -1.87
HCN1O60741 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.38□□□□□ -1.87
HCN1O60741 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.38□□□□□ -1.87
HCN1O60741 AC016065.2-201ENST00000514530 444 ntBASIC3.38□□□□□ -1.87
HCN1O60741 HIGD1AP3-201ENST00000515857 278 ntBASIC3.38□□□□□ -1.87
HCN1O60741 RN7SKP244-201ENST00000516513 307 ntBASIC3.38□□□□□ -1.87
HCN1O60741 DUXAP2-201ENST00000519198 589 ntBASIC3.38□□□□□ -1.87
HCN1O60741 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.38□□□□□ -1.87
HCN1O60741 HIGD1AP6-201ENST00000521833 279 ntBASIC3.38□□□□□ -1.87
HCN1O60741 HMGB1P1-201ENST00000522557 636 ntBASIC3.38□□□□□ -1.87
HCN1O60741 RGS4-207ENST00000527809 817 ntTSL 4 BASIC3.38□□□□□ -1.87
HCN1O60741 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC3.38□□□□□ -1.87
HCN1O60741 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.38□□□□□ -1.87
HCN1O60741 SYF2P1-201ENST00000550658 413 ntBASIC3.38□□□□□ -1.87
HCN1O60741 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.38□□□□□ -1.87
HCN1O60741 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.38□□□□□ -1.87
HCN1O60741 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.38□□□□□ -1.87
HCN1O60741 MIR3944-201ENST00000581277 108 ntBASIC3.38□□□□□ -1.87
HCN1O60741 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.38□□□□□ -1.87
HCN1O60741 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.38□□□□□ -1.87
HCN1O60741 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.38□□□□□ -1.87
HCN1O60741 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.38□□□□□ -1.87
HCN1O60741 AC079684.1-201ENST00000621405 437 ntBASIC3.38□□□□□ -1.87
HCN1O60741 PLCE1P1-201ENST00000622094 305 ntBASIC3.38□□□□□ -1.87
HCN1O60741 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.38□□□□□ -1.87
HCN1O60741 AC009093.8-201ENST00000641769 292 ntBASIC3.38□□□□□ -1.87
HCN1O60741 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms