Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5□□□□□ -1.61
PRPF3O43395 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC5□□□□□ -1.61
PRPF3O43395 AL109766.1-201ENST00000555080 552 ntBASIC5□□□□□ -1.61
PRPF3O43395 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC5□□□□□ -1.61
PRPF3O43395 RPL26P30-202ENST00000602923 645 ntBASIC5□□□□□ -1.61
PRPF3O43395 AC025588.3-201ENST00000604182 274 ntBASIC5□□□□□ -1.61
PRPF3O43395 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PRPF3O43395 AL445264.1-201ENST00000621719 171 ntBASIC5□□□□□ -1.61
PRPF3O43395 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5□□□□□ -1.61
PRPF3O43395 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PRPF3O43395 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
PRPF3O43395 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5□□□□□ -1.61
PRPF3O43395 ELL2P3-201ENST00000457883 1602 ntBASIC5□□□□□ -1.61
PRPF3O43395 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PRPF3O43395 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC5□□□□□ -1.61
PRPF3O43395 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.99□□□□□ -1.61
PRPF3O43395 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF3O43395 AC074029.4-201ENST00000624796 1859 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF3O43395 AC067945.1-201ENST00000342609 618 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 RNU1-15P-201ENST00000353977 144 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 RNA5SP509-201ENST00000364577 119 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF3O43395 Y_RNA.560-201ENST00000384689 102 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PRPF3O43395 MIR1305-201ENST00000408300 86 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC4.99□□□□□ -1.61
PRPF3O43395 RNU6-920P-201ENST00000410926 92 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.99□□□□□ -1.61
PRPF3O43395 EIF1P3-201ENST00000423841 334 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC4.99□□□□□ -1.61
PRPF3O43395 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.99□□□□□ -1.61
PRPF3O43395 ELOCP8-201ENST00000439309 332 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 CBX1P1-201ENST00000440184 427 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 ELOCP15-201ENST00000442090 332 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 AL512326.1-201ENST00000443050 721 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 MTND1P29-201ENST00000448112 647 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.99□□□□□ -1.61
PRPF3O43395 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.99□□□□□ -1.61
PRPF3O43395 snoU109.4-201ENST00000458953 143 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 AC021678.1-201ENST00000505195 936 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 POU5F1P7-201ENST00000508759 541 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.99□□□□□ -1.61
PRPF3O43395 PTGES3P3-201ENST00000511479 482 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 MTCO3P28-201ENST00000513351 515 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.99□□□□□ -1.61
PRPF3O43395 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.99□□□□□ -1.61
PRPF3O43395 COX6CP8-201ENST00000522620 226 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.99□□□□□ -1.61
PRPF3O43395 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.99□□□□□ -1.61
PRPF3O43395 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.99□□□□□ -1.61
PRPF3O43395 LARP7P2-201ENST00000575306 125 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 MIR3915-201ENST00000578518 97 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 AF131215.7-201ENST00000602443 707 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.99□□□□□ -1.61
PRPF3O43395 MTCYBP22-201ENST00000603788 447 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 AC112230.1-201ENST00000604342 547 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 AC090186.1-201ENST00000605991 572 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.99□□□□□ -1.61
PRPF3O43395 AC064807.4-201ENST00000607201 407 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 AC009237.17-201ENST00000618111 748 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.99□□□□□ -1.61
PRPF3O43395 MIR6715B-201ENST00000637172 77 ntBASIC4.99□□□□□ -1.61
PRPF3O43395 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.99□□□□□ -1.61
PRPF3O43395 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF3O43395 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PRPF3O43395 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.98□□□□□ -1.61
PRPF3O43395 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF3O43395 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF3O43395 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.98□□□□□ -1.61
PRPF3O43395 RNA5SP28-201ENST00000363841 119 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.98□□□□□ -1.61
PRPF3O43395 RNU6-837P-201ENST00000391056 108 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PRPF3O43395 AL355379.1-201ENST00000405542 640 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 MIR320C1-201ENST00000408566 88 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.98□□□□□ -1.61
PRPF3O43395 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF3O43395 AL807761.1-201ENST00000417622 171 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 SEPT2P1-201ENST00000419651 180 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 RPL7P30-201ENST00000420888 709 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 GLRXP1-201ENST00000423261 334 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 AC005517.2-201ENST00000424673 553 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 MTND4P32-201ENST00000437189 1237 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 AL831737.1-201ENST00000441288 271 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.98□□□□□ -1.61
PRPF3O43395 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.98□□□□□ -1.61
PRPF3O43395 RPL23AP81-201ENST00000455252 467 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.98□□□□□ -1.61
PRPF3O43395 AC006463.2-201ENST00000473326 348 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 RN7SL691P-201ENST00000494487 301 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.98□□□□□ -1.61
PRPF3O43395 STMN1P2-201ENST00000508435 439 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC4.98□□□□□ -1.61
PRPF3O43395 RNA5SP73-201ENST00000516744 108 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 RNU4-60P-201ENST00000517239 135 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 MTCO1P49-201ENST00000523429 802 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.98□□□□□ -1.61
PRPF3O43395 AC006064.5-201ENST00000541782 248 ntBASIC4.98□□□□□ -1.61
PRPF3O43395 AL121766.1-201ENST00000547436 487 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms