Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 AF117829.1-206ENST00000621883 3802 ntBASIC3.84□□□□□ -1.8
RTCAO00442 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.84□□□□□ -1.8
RTCAO00442 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.8
RTCAO00442 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTCAO00442 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
RTCAO00442 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTCAO00442 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTCAO00442 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTCAO00442 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RTCAO00442 SNORA60-201ENST00000362396 134 ntBASIC3.83□□□□□ -1.8
RTCAO00442 SNORD116-23-201ENST00000384645 92 ntBASIC3.83□□□□□ -1.8
RTCAO00442 SNORA3C-201ENST00000408792 125 ntBASIC3.83□□□□□ -1.8
RTCAO00442 RPL21P32-201ENST00000419877 477 ntBASIC3.83□□□□□ -1.8
RTCAO00442 RPF2P1-201ENST00000424137 906 ntBASIC3.83□□□□□ -1.8
RTCAO00442 DUTP6-201ENST00000425573 462 ntBASIC3.83□□□□□ -1.8
RTCAO00442 C1DP1-201ENST00000426049 402 ntBASIC3.83□□□□□ -1.8
RTCAO00442 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.83□□□□□ -1.8
RTCAO00442 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.83□□□□□ -1.8
RTCAO00442 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.83□□□□□ -1.8
RTCAO00442 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.83□□□□□ -1.8
RTCAO00442 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.83□□□□□ -1.8
RTCAO00442 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.83□□□□□ -1.8
RTCAO00442 HMGB3P6-201ENST00000444896 598 ntBASIC3.83□□□□□ -1.8
RTCAO00442 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.83□□□□□ -1.8
RTCAO00442 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.83□□□□□ -1.8
RTCAO00442 PABPC1P3-201ENST00000469174 459 ntBASIC3.83□□□□□ -1.8
RTCAO00442 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.83□□□□□ -1.8
RTCAO00442 AC020898.1-201ENST00000474167 787 ntBASIC3.83□□□□□ -1.8
RTCAO00442 AC012181.1-201ENST00000479895 423 ntBASIC3.83□□□□□ -1.8
RTCAO00442 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.83□□□□□ -1.8
RTCAO00442 CEACAMP10-202ENST00000495431 496 ntBASIC3.83□□□□□ -1.8
RTCAO00442 RPL31P61-201ENST00000496160 376 ntBASIC3.83□□□□□ -1.8
RTCAO00442 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.83□□□□□ -1.8
RTCAO00442 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.83□□□□□ -1.8
RTCAO00442 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.83□□□□□ -1.8
RTCAO00442 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.83□□□□□ -1.8
RTCAO00442 SULT1C2P1-202ENST00000562418 459 ntBASIC3.83□□□□□ -1.8
RTCAO00442 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.83□□□□□ -1.8
RTCAO00442 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.83□□□□□ -1.8
RTCAO00442 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.83□□□□□ -1.8
RTCAO00442 AL035411.2-201ENST00000604022 421 ntBASIC3.83□□□□□ -1.8
RTCAO00442 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.83□□□□□ -1.8
RTCAO00442 AC034229.4-201ENST00000607861 441 ntBASIC3.83□□□□□ -1.8
RTCAO00442 AC099676.1-201ENST00000608886 657 ntBASIC3.83□□□□□ -1.8
RTCAO00442 AC006329.2-201ENST00000611491 394 ntBASIC3.83□□□□□ -1.8
RTCAO00442 AL592148.2-201ENST00000612210 372 ntBASIC3.83□□□□□ -1.8
RTCAO00442 AC006338.2-201ENST00000616864 791 ntBASIC3.83□□□□□ -1.8
RTCAO00442 AC009318.4-201ENST00000620496 486 ntBASIC3.83□□□□□ -1.8
RTCAO00442 AP002001.2-201ENST00000529025 1469 ntBASIC3.83□□□□□ -1.8
RTCAO00442 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTCAO00442 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTCAO00442 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RTCAO00442 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTCAO00442 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.83□□□□□ -1.8
RTCAO00442 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RTCAO00442 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RTCAO00442 RLIMP1-201ENST00000339626 1680 ntBASIC3.82□□□□□ -1.8
RTCAO00442 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RTCAO00442 AC027287.1-201ENST00000553115 1453 ntBASIC3.82□□□□□ -1.8
RTCAO00442 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTCAO00442 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC3.82□□□□□ -1.8
RTCAO00442 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RTCAO00442 RNU6-224P-201ENST00000384055 107 ntBASIC3.82□□□□□ -1.8
RTCAO00442 RPS26P8-201ENST00000393490 348 ntBASIC3.82□□□□□ -1.8
RTCAO00442 AL022722.2-201ENST00000402519 180 ntBASIC3.82□□□□□ -1.8
RTCAO00442 RNU4-6P-201ENST00000410804 122 ntBASIC3.82□□□□□ -1.8
RTCAO00442 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.82□□□□□ -1.8
RTCAO00442 AL356095.1-201ENST00000417217 199 ntBASIC3.82□□□□□ -1.8
RTCAO00442 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.82□□□□□ -1.8
RTCAO00442 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.82□□□□□ -1.8
RTCAO00442 AL035410.1-201ENST00000427409 427 ntBASIC3.82□□□□□ -1.8
RTCAO00442 MTCYBP32-201ENST00000427945 1084 ntBASIC3.82□□□□□ -1.8
RTCAO00442 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.82□□□□□ -1.8
RTCAO00442 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.82□□□□□ -1.8
RTCAO00442 MTND2P5-201ENST00000432656 1006 ntBASIC3.82□□□□□ -1.8
RTCAO00442 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC3.82□□□□□ -1.8
RTCAO00442 AC127537.2-201ENST00000439258 465 ntBASIC3.82□□□□□ -1.8
RTCAO00442 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.82□□□□□ -1.8
RTCAO00442 AL451050.1-201ENST00000450126 415 ntBASIC3.82□□□□□ -1.8
RTCAO00442 MRPL42P4-201ENST00000453267 443 ntBASIC3.82□□□□□ -1.8
RTCAO00442 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RTCAO00442 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.82□□□□□ -1.8
RTCAO00442 AL136126.1-201ENST00000473603 402 ntBASIC3.82□□□□□ -1.8
RTCAO00442 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.82□□□□□ -1.8
RTCAO00442 AC023632.1-201ENST00000518463 375 ntBASIC3.82□□□□□ -1.8
RTCAO00442 RPL12P22-201ENST00000519073 490 ntBASIC3.82□□□□□ -1.8
RTCAO00442 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC3.82□□□□□ -1.8
RTCAO00442 AL163153.1-201ENST00000554223 283 ntBASIC3.82□□□□□ -1.8
RTCAO00442 AL132857.1-201ENST00000555180 708 ntBASIC3.82□□□□□ -1.8
RTCAO00442 GNRHR2P1-201ENST00000555315 631 ntBASIC3.82□□□□□ -1.8
RTCAO00442 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.82□□□□□ -1.8
RTCAO00442 AC022968.1-201ENST00000567372 442 ntBASIC3.82□□□□□ -1.8
RTCAO00442 MIR5047-201ENST00000579212 100 ntBASIC3.82□□□□□ -1.8
RTCAO00442 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.82□□□□□ -1.8
RTCAO00442 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.82□□□□□ -1.8
RTCAO00442 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RTCAO00442 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.82□□□□□ -1.8
RTCAO00442 XIAPP1-201ENST00000603162 600 ntBASIC3.82□□□□□ -1.8
RTCAO00442 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.82□□□□□ -1.8
RTCAO00442 AL159169.3-201ENST00000608871 561 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms