Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC007424.1-203ENST00000554613 687 ntBASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC009712.1-201ENST00000564938 316 ntBASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 IPO5P1-202ENST00000600039 287 ntBASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC068790.4-201ENST00000602474 263 ntBASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AL592221.1-201ENST00000605266 382 ntBASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AL158042.1-201ENST00000605338 460 ntBASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC116651.1-201ENST00000609724 556 ntBASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC092184.1-201ENST00000625042 715 ntBASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC244205.2-202ENST00000635781 342 ntBASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AL359893.1-201ENST00000447628 1580 ntBASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
TRBV4-1A0A0J9YWV2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC005539.1-201ENST00000443768 1479 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AP002001.2-201ENST00000529025 1469 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC104454.1-201ENST00000421341 1401 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 ZNF37BP-203ENST00000452306 1352 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC108032.1-201ENST00000416706 207 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 TIMM9P2-201ENST00000419324 266 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 SKP1P1-201ENST00000438081 489 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 TRGVB-201ENST00000453257 471 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC098824.1-201ENST00000453565 980 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 RPL18AP17-201ENST00000455326 198 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AL136126.1-201ENST00000473603 402 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC084198.1-201ENST00000477747 402 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 RPL21P103-201ENST00000479921 488 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC007686.1-201ENST00000488511 463 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 SETP14-201ENST00000497538 873 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC146944.2-203ENST00000502493 354 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC139495.1-202ENST00000513164 354 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 HIGD1AP3-201ENST00000515857 278 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 RNA5SP208-201ENST00000516156 78 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 SUMO2P20-201ENST00000520803 283 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AP001636.2-201ENST00000525517 696 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 MIR4277-201ENST00000578298 84 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 MIR5096-201ENST00000583713 70 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 VN1R82P-201ENST00000601481 356 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC025946.2-201ENST00000603398 234 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 ELOCP35-201ENST00000604289 336 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 DPRXP5-201ENST00000604662 539 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC092650.2-201ENST00000619984 902 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC073530.2-201ENST00000623987 261 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC017037.3-201ENST00000625016 472 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 OR6C71P-202ENST00000641886 1107 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC008725.1-201ENST00000605123 2263 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC095050.2-201ENST00000510748 1458 ntBASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
TRBV4-1A0A0J9YWV2 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 MIR153-1-201ENST00000384914 90 ntBASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.53□□□□□ -1.84
TRBV4-1A0A0J9YWV2 AC016397.1-201ENST00000412463 242 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms