Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.89□□□□□ -1.47
HRH3Q9Y5N1 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
HRH3Q9Y5N1 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
HRH3Q9Y5N1 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC5.89□□□□□ -1.47
HRH3Q9Y5N1 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
HRH3Q9Y5N1 AC005332.9-201ENST00000620266 2921 ntBASIC5.89□□□□□ -1.47
HRH3Q9Y5N1 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
HRH3Q9Y5N1 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
HRH3Q9Y5N1 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HRH3Q9Y5N1 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
HRH3Q9Y5N1 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
HRH3Q9Y5N1 PANDAR-201ENST00000629595 1506 ntBASIC5.89□□□□□ -1.47
HRH3Q9Y5N1 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
HRH3Q9Y5N1 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 OR56A5-201ENST00000340110 738 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 RNU6-1284P-201ENST00000363701 100 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 RNVU1-3-201ENST00000364313 161 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 RN7SKP269-201ENST00000365545 319 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 EZH2P1-201ENST00000431167 291 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC007679.3-201ENST00000434035 414 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 HMGN1P2-201ENST00000445197 310 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 SNORD127-201ENST00000458892 86 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC022206.1-201ENST00000495947 347 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 RNU6-1023P-201ENST00000516137 106 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 RNA5SP384-201ENST00000516615 116 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 RNU6-347P-201ENST00000516658 105 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 OR5D17P-201ENST00000531492 978 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 RPA2P3-201ENST00000533268 770 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 DYNLL1P4-201ENST00000549314 266 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AL049779.3-201ENST00000557141 606 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 MIR4502-201ENST00000580432 81 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 MIR3128-201ENST00000581957 66 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 MTND4LP5-201ENST00000605152 292 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 SNORD58B-201ENST00000607313 66 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AL161423.1-201ENST00000613700 262 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AL445647.2-201ENST00000615170 130 ntBASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 BDNF-203ENST00000395978 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
HRH3Q9Y5N1 AC009313.2-201ENST00000417893 1941 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 GNL2P1-201ENST00000451274 2190 ntBASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
HRH3Q9Y5N1 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms