Protein–RNA interactions for Protein: Q9UEU0

VTI1B, Vesicle transport through interaction with t-SNAREs homolog 1B, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BQ9UEU0 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 Y_RNA.166-201ENST00000363730 102 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 Y_RNA.356-201ENST00000365475 113 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 MIR130A-201ENST00000385274 89 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AL109755.1-201ENST00000401791 649 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 MTCYBP8-201ENST00000422855 651 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 MTND1P14-201ENST00000427400 950 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 SRIP2-201ENST00000428470 166 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 CKS1BP5-201ENST00000434172 273 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AC234775.1-201ENST00000454247 670 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AC007537.2-201ENST00000472093 511 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AC093278.1-201ENST00000494700 600 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 NIPA2P2-201ENST00000496376 1083 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AC116562.3-201ENST00000506136 177 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 FAM60DP-201ENST00000524174 632 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AC068587.5-201ENST00000528506 175 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AP000648.1-201ENST00000529682 397 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 MIR4293-201ENST00000584305 78 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AP001029.3-201ENST00000588063 596 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 MIR6778-201ENST00000617912 73 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 CYP4F35P-202ENST00000636121 390 ntBASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
VTI1BQ9UEU0 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC026951.1-201ENST00000559530 2459 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 RNA5SP326-201ENST00000363209 110 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 RNA5SP223-201ENST00000365174 120 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 RN7SKP81-201ENST00000365603 331 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 Y_RNA.535-201ENST00000384612 99 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC013442.1-201ENST00000397347 228 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 DBIP1-201ENST00000401435 260 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AL162578.1-201ENST00000406202 378 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 RNU2-36P-201ENST00000410361 191 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 RNA5SP296-201ENST00000410523 111 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 RNU4-78P-201ENST00000410940 126 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AL354890.1-201ENST00000413730 346 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 PPIAP3-201ENST00000450588 505 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 RNU7-182P-201ENST00000459009 62 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 MRPS17P3-201ENST00000465453 385 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 RN7SL591P-201ENST00000496150 292 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 SNORA70.11-201ENST00000515987 138 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 SNORA70.13-201ENST00000516116 138 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC103783.1-201ENST00000520506 373 ntBASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.54□□□□□ -1.52
VTI1BQ9UEU0 PCNAP4-201ENST00000532690 730 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms