Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 SNRPGP18-201ENST00000553000 214 ntBASIC5.42□□□□□ -1.54
CITED4Q96RK1 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.42□□□□□ -1.54
CITED4Q96RK1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.42□□□□□ -1.54
CITED4Q96RK1 RN7SL426P-201ENST00000579106 295 ntBASIC5.42□□□□□ -1.54
CITED4Q96RK1 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CITED4Q96RK1 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.42□□□□□ -1.54
CITED4Q96RK1 NQO2-209ENST00000606474 470 ntTSL 3 BASIC5.42□□□□□ -1.54
CITED4Q96RK1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC5.42□□□□□ -1.54
CITED4Q96RK1 AL157817.1-201ENST00000614264 790 ntBASIC5.42□□□□□ -1.54
CITED4Q96RK1 MIR6128-201ENST00000615528 109 ntBASIC5.42□□□□□ -1.54
CITED4Q96RK1 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC5.42□□□□□ -1.54
CITED4Q96RK1 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC5.42□□□□□ -1.54
CITED4Q96RK1 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC5.42□□□□□ -1.54
CITED4Q96RK1 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
CITED4Q96RK1 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CITED4Q96RK1 FAM91A3P-201ENST00000456826 2544 ntBASIC5.42□□□□□ -1.54
CITED4Q96RK1 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.42□□□□□ -1.54
CITED4Q96RK1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CITED4Q96RK1 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
CITED4Q96RK1 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CITED4Q96RK1 SOCS5P3-201ENST00000425115 1576 ntBASIC5.42□□□□□ -1.54
CITED4Q96RK1 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CITED4Q96RK1 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 ZNF519P1-201ENST00000449011 1626 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CITED4Q96RK1 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CITED4Q96RK1 RNU6-562P-201ENST00000362731 107 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 RNA5SP223-201ENST00000365174 120 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CITED4Q96RK1 SNORA70.8-201ENST00000384231 136 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 RPL7P10-201ENST00000417407 739 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 PDSS1P1-201ENST00000422953 1114 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 UQCRHP1-204ENST00000424609 274 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 HMGN2P27-201ENST00000427352 270 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 SNAP23P1-201ENST00000433229 246 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 AF228730.2-201ENST00000438784 848 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 AC079922.1-201ENST00000443291 359 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 HBG2-204ENST00000444587 307 ntTSL 2 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 AC005517.1-201ENST00000452091 489 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 RNU7-167P-201ENST00000459160 62 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 SNRPCP11-201ENST00000492453 205 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 MTCYBP40-201ENST00000509390 1135 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 AC114781.3-201ENST00000512083 142 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 RN7SKP70-201ENST00000516655 271 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 RNU6-1332P-201ENST00000516666 104 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 FTH1P11-201ENST00000517577 551 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 AC069061.3-201ENST00000582254 823 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 AC174048.1-201ENST00000603389 144 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 AC010378.1-201ENST00000619270 362 ntBASIC5.41□□□□□ -1.54
CITED4Q96RK1 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CITED4Q96RK1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CITED4Q96RK1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CITED4Q96RK1 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CITED4Q96RK1 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CITED4Q96RK1 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.4□□□□□ -1.54
CITED4Q96RK1 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CITED4Q96RK1 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.4□□□□□ -1.54
CITED4Q96RK1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CITED4Q96RK1 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CITED4Q96RK1 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
CITED4Q96RK1 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.4□□□□□ -1.54
CITED4Q96RK1 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.4□□□□□ -1.54
CITED4Q96RK1 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CITED4Q96RK1 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
CITED4Q96RK1 Y_RNA.145-201ENST00000363527 102 ntBASIC5.4□□□□□ -1.54
CITED4Q96RK1 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
CITED4Q96RK1 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC5.4□□□□□ -1.54
CITED4Q96RK1 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CITED4Q96RK1 RPL24P2-201ENST00000421023 475 ntBASIC5.4□□□□□ -1.54
CITED4Q96RK1 Z82198.3-201ENST00000421145 199 ntBASIC5.4□□□□□ -1.54
CITED4Q96RK1 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.4□□□□□ -1.54
CITED4Q96RK1 RPL31P12-201ENST00000422587 358 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 106 ms