Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HPS3Q969F9 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
HPS3Q969F9 RAD17P1-201ENST00000418130 2042 ntBASIC4.94□□□□□ -1.62
HPS3Q969F9 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
HPS3Q969F9 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HPS3Q969F9 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HPS3Q969F9 AL049555.1-201ENST00000562834 1933 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HPS3Q969F9 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
HPS3Q969F9 MTND4P16-201ENST00000466108 1367 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.93□□□□□ -1.62
HPS3Q969F9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HPS3Q969F9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HPS3Q969F9 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HPS3Q969F9 Y_RNA.194-201ENST00000363985 102 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HPS3Q969F9 RNU6-398P-201ENST00000384143 109 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 MIR708-201ENST00000390708 88 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC025750.1-201ENST00000399891 379 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AL031679.1-201ENST00000400616 525 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 RN7SKP142-201ENST00000411236 328 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 RPS20P14-201ENST00000412545 360 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.93□□□□□ -1.62
HPS3Q969F9 AL389915.1-201ENST00000422463 466 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 CYCSP46-201ENST00000423569 204 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HPS3Q969F9 AL035410.1-201ENST00000427409 427 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 DNAJC19P7-201ENST00000428811 344 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 PSMA2P3-201ENST00000429685 675 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.93□□□□□ -1.62
HPS3Q969F9 LARP1BP3-201ENST00000437229 869 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 TRIM60P18-201ENST00000441518 828 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 HSPE1P28-201ENST00000443139 211 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.93□□□□□ -1.62
HPS3Q969F9 AL162388.1-201ENST00000450912 352 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 SNRPGP9-201ENST00000456025 225 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 RNU6-956P-201ENST00000458868 103 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC087312.1-201ENST00000471411 480 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC022795.1-201ENST00000473808 480 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.93□□□□□ -1.62
HPS3Q969F9 AC106872.3-201ENST00000495104 446 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC021678.1-201ENST00000505195 936 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.93□□□□□ -1.62
HPS3Q969F9 AC109458.1-201ENST00000508858 316 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.93□□□□□ -1.62
HPS3Q969F9 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.93□□□□□ -1.62
HPS3Q969F9 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HPS3Q969F9 IGLV3-26-201ENST00000520756 302 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HPS3Q969F9 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.93□□□□□ -1.62
HPS3Q969F9 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.93□□□□□ -1.62
HPS3Q969F9 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.93□□□□□ -1.62
HPS3Q969F9 AL161713.1-201ENST00000555538 145 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HPS3Q969F9 AC084783.1-201ENST00000565846 910 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 HNRNPCP4-201ENST00000571636 900 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC4.93□□□□□ -1.62
HPS3Q969F9 DHX40P1-201ENST00000588725 1412 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC4.93□□□□□ -1.62
HPS3Q969F9 BNIP3P23-201ENST00000599655 511 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC119751.7-201ENST00000600494 245 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC008782.1-201ENST00000603386 430 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 YWHAQP7-201ENST00000603536 658 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC112187.2-201ENST00000604345 283 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC068276.1-201ENST00000605793 379 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HPS3Q969F9 AP000346.3-201ENST00000622821 210 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 AC025048.6-202ENST00000627667 438 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
HPS3Q969F9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HPS3Q969F9 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC4.93□□□□□ -1.62
HPS3Q969F9 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.93□□□□□ -1.62
HPS3Q969F9 AC097504.1-201ENST00000515103 2415 ntBASIC4.93□□□□□ -1.62
HPS3Q969F9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.93□□□□□ -1.62
HPS3Q969F9 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HPS3Q969F9 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.92□□□□□ -1.62
HPS3Q969F9 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
HPS3Q969F9 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
HPS3Q969F9 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
HPS3Q969F9 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HPS3Q969F9 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
HPS3Q969F9 RNVU1-3-201ENST00000364313 161 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 Y_RNA.553-201ENST00000384670 102 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 DHFRP6-201ENST00000401776 268 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HPS3Q969F9 AC009237.10-201ENST00000414112 510 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC4.92□□□□□ -1.62
HPS3Q969F9 MTCO2P5-201ENST00000422621 426 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 RPS27AP7-201ENST00000422792 455 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 C4BPAP2-201ENST00000428434 478 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 RPL23AP1-201ENST00000428990 471 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AL356276.2-201ENST00000435919 558 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AC092473.1-201ENST00000441098 221 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.92□□□□□ -1.62
HPS3Q969F9 COX6CP12-201ENST00000446748 202 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AP000936.2-201ENST00000447151 681 ntBASIC4.92□□□□□ -1.62
HPS3Q969F9 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.92□□□□□ -1.62
HPS3Q969F9 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC4.92□□□□□ -1.62
HPS3Q969F9 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.92□□□□□ -1.62
HPS3Q969F9 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms