Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AP001636.2-201ENST00000525517 696 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC239860.2-201ENST00000525886 270 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC103843.2-201ENST00000530523 682 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC005476.1-201ENST00000554427 397 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AP001029.3-201ENST00000588063 596 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 OR4G1P-201ENST00000588632 938 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 BDH2P1-201ENST00000602288 736 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC073111.2-201ENST00000605657 1075 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC092354.2-201ENST00000607786 514 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC019176.2-201ENST00000611579 315 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AC127502.3-201ENST00000636170 1206 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 MTND5P27-201ENST00000428871 1720 ntBASIC3.22□□□□□ -1.89
CLHC1Q8NHS4 AL355578.1-201ENST00000607405 1328 ntBASIC3.21□□□□□ -1.89
CLHC1Q8NHS4 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.21□□□□□ -1.89
CLHC1Q8NHS4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 DDX6P1-205ENST00000441966 1436 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 RNU1-75P-201ENST00000347264 129 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 RNU6-805P-201ENST00000365643 106 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 SNORD17-201ENST00000390930 237 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 RN7SKP27-201ENST00000410684 333 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 RNA5SP31-201ENST00000411144 127 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 RNA5SP107-201ENST00000411358 122 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 AC093578.1-201ENST00000415219 368 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 AL445528.1-201ENST00000426330 420 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 HMGB3P11-201ENST00000440127 604 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 PLGLA-201ENST00000465668 449 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 RN7SKP282-201ENST00000516824 299 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 RN7SKP116-201ENST00000516902 319 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 RNU1-45P-201ENST00000517191 141 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 TRAV11-201ENST00000539512 339 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 AC006518.1-201ENST00000541449 943 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 AC106785.1-201ENST00000565935 262 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 SNORD84-203ENST00000584275 78 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 SUMO2P14-201ENST00000604488 293 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 AC073387.2-201ENST00000604797 784 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 AC093010.3-201ENST00000570269 15214 ntBASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.21□□□□□ -1.9
CLHC1Q8NHS4 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 METTL21EP-201ENST00000298105 713 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 RNU1-85P-201ENST00000364127 164 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 SFR1P1-201ENST00000403720 688 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 RNU6-1077P-201ENST00000410506 102 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 RAB9AP3-201ENST00000412737 573 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 SYF2P2-201ENST00000417620 583 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 ETF1P3-201ENST00000430422 1160 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 RPS27P5-201ENST00000444247 244 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 RAB9AP1-201ENST00000449393 573 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 AC017015.1-201ENST00000477387 286 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 AC108078.3-201ENST00000502633 489 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 AC112198.1-201ENST00000505369 1220 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 SNORA31.20-201ENST00000517111 133 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 AC004024.1-201ENST00000549244 247 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 MTCYBP28-201ENST00000566728 1132 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 MIR4504-201ENST00000577413 92 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 AC015802.5-201ENST00000607478 399 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 MIR7851-201ENST00000610611 160 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 AC009032.1-201ENST00000617574 431 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 ELL2P4-201ENST00000446870 1376 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 API5P2-201ENST00000397055 1498 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 AL359893.1-201ENST00000447628 1580 ntBASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.2□□□□□ -1.9
CLHC1Q8NHS4 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms