Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.9□□□□□ -1.46
NPAS4Q8IUM7 OR1F2P-201ENST00000570470 933 ntBASIC5.9□□□□□ -1.46
NPAS4Q8IUM7 HNRNPCP4-201ENST00000571636 900 ntBASIC5.9□□□□□ -1.46
NPAS4Q8IUM7 MIR4436B2-201ENST00000581415 91 ntBASIC5.9□□□□□ -1.46
NPAS4Q8IUM7 MIR4436B1-201ENST00000583272 91 ntBASIC5.9□□□□□ -1.46
NPAS4Q8IUM7 AC105224.1-201ENST00000587055 421 ntBASIC5.9□□□□□ -1.46
NPAS4Q8IUM7 AL669831.4-202ENST00000590817 238 ntBASIC5.9□□□□□ -1.46
NPAS4Q8IUM7 LLPHP1-201ENST00000603571 367 ntBASIC5.9□□□□□ -1.46
NPAS4Q8IUM7 Z98200.1-201ENST00000607298 470 ntBASIC5.9□□□□□ -1.46
NPAS4Q8IUM7 AL050343.2-201ENST00000607338 280 ntBASIC5.9□□□□□ -1.46
NPAS4Q8IUM7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.9□□□□□ -1.46
NPAS4Q8IUM7 YWHAEP7-203ENST00000622054 312 ntBASIC5.9□□□□□ -1.46
NPAS4Q8IUM7 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.9□□□□□ -1.46
NPAS4Q8IUM7 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.9□□□□□ -1.46
NPAS4Q8IUM7 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
NPAS4Q8IUM7 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
NPAS4Q8IUM7 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
NPAS4Q8IUM7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
NPAS4Q8IUM7 AC114947.2-201ENST00000565748 2125 ntBASIC5.9□□□□□ -1.47
NPAS4Q8IUM7 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NPAS4Q8IUM7 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
NPAS4Q8IUM7 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
NPAS4Q8IUM7 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
NPAS4Q8IUM7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC5.9□□□□□ -1.47
NPAS4Q8IUM7 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
NPAS4Q8IUM7 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 SNORA17.1-201ENST00000362945 126 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 Y_RNA.394-201ENST00000383942 103 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 RNU1-136P-201ENST00000384181 164 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 RN7SKP247-201ENST00000411094 308 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 RN7SKP279-201ENST00000411383 298 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 AL807761.1-201ENST00000417622 171 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 AL391219.1-201ENST00000422570 483 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 MTND2P23-201ENST00000422990 651 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 GAPDHP25-201ENST00000447061 1001 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 RAD23BP3-201ENST00000454157 1152 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 AC234775.1-201ENST00000454247 670 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 RNU7-63P-201ENST00000459054 62 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 RN7SL189P-201ENST00000468631 289 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 NAF1-205ENST00000509434 385 ntTSL 3 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 AC016559.2-201ENST00000510759 359 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 AC090572.1-201ENST00000519251 160 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 HPRT1P3-201ENST00000539521 576 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 AC137627.1-201ENST00000545761 289 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 AC005341.1-201ENST00000571086 708 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 AP005403.1-201ENST00000579720 229 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 AC010928.3-201ENST00000587712 541 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 AC138965.3-201ENST00000623875 498 ntBASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
NPAS4Q8IUM7 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC022893.2-201ENST00000564832 3296 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AL121886.1-201ENST00000358609 435 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 RNU4-79P-201ENST00000362764 141 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 RNY3P3-201ENST00000363816 102 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 U3.11-201ENST00000364476 212 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC019155.1-201ENST00000382242 574 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 RNU6-356P-201ENST00000384140 107 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 CYB5AP4-201ENST00000396692 399 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 RNA5SP251-201ENST00000410614 137 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 Y_RNA.625-201ENST00000411256 107 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 SNRPFP1-201ENST00000414761 252 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC093162.1-201ENST00000419682 124 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 DDX3P2-201ENST00000446138 111 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AL590399.6-201ENST00000446396 307 ntBASIC5.88□□□□□ -1.47
NPAS4Q8IUM7 AC104651.2-201ENST00000447549 528 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms