Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC009263.1-201ENST00000441193 1239 ntBASIC2.18□□□□□ -2.06
VPS13CQ709C8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC2.18□□□□□ -2.06
VPS13CQ709C8 AC092608.2-201ENST00000624427 218 ntBASIC2.18□□□□□ -2.06
VPS13CQ709C8 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
VPS13CQ709C8 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13CQ709C8 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.18□□□□□ -2.06
VPS13CQ709C8 AC008079.2-201ENST00000623543 20396 ntBASIC2.18□□□□□ -2.06
VPS13CQ709C8 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13CQ709C8 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13CQ709C8 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
VPS13CQ709C8 SNORA80E-201ENST00000384744 137 ntBASIC2.18□□□□□ -2.06
VPS13CQ709C8 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC2.18□□□□□ -2.06
VPS13CQ709C8 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.18□□□□□ -2.06
VPS13CQ709C8 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
VPS13CQ709C8 AL592494.2-201ENST00000425455 1548 ntBASIC2.17□□□□□ -2.06
VPS13CQ709C8 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
VPS13CQ709C8 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
VPS13CQ709C8 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VPS13CQ709C8 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VPS13CQ709C8 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VPS13CQ709C8 OR2AS1P-201ENST00000427827 319 ntBASIC2.17□□□□□ -2.06
VPS13CQ709C8 RPL12P18-201ENST00000437175 325 ntBASIC2.17□□□□□ -2.06
VPS13CQ709C8 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS13CQ709C8 HMGN1P18-201ENST00000457642 277 ntBASIC2.17□□□□□ -2.06
VPS13CQ709C8 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS13CQ709C8 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.17□□□□□ -2.06
VPS13CQ709C8 RNA5SP320-201ENST00000516263 124 ntBASIC2.17□□□□□ -2.06
VPS13CQ709C8 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS13CQ709C8 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.17□□□□□ -2.06
VPS13CQ709C8 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
VPS13CQ709C8 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
VPS13CQ709C8 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
VPS13CQ709C8 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC2.17□□□□□ -2.06
VPS13CQ709C8 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
VPS13CQ709C8 MIR30E-201ENST00000362104 92 ntBASIC2.17□□□□□ -2.06
VPS13CQ709C8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.17□□□□□ -2.06
VPS13CQ709C8 Z82209.1-201ENST00000422141 2135 ntBASIC2.17□□□□□ -2.06
VPS13CQ709C8 CKS1BP1-201ENST00000555221 240 ntBASIC2.17□□□□□ -2.06
VPS13CQ709C8 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
VPS13CQ709C8 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
VPS13CQ709C8 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.17□□□□□ -2.06
VPS13CQ709C8 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
VPS13CQ709C8 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
VPS13CQ709C8 Y_RNA.338-201ENST00000365320 114 ntBASIC2.16□□□□□ -2.06
VPS13CQ709C8 OR5BN1P-201ENST00000532955 829 ntBASIC2.16□□□□□ -2.06
VPS13CQ709C8 AC006111.3-201ENST00000622137 383 ntBASIC2.16□□□□□ -2.06
VPS13CQ709C8 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VPS13CQ709C8 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.16□□□□□ -2.06
VPS13CQ709C8 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VPS13CQ709C8 RNU1-35P-201ENST00000362782 153 ntBASIC2.16□□□□□ -2.06
VPS13CQ709C8 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VPS13CQ709C8 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.16□□□□□ -2.06
VPS13CQ709C8 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.16□□□□□ -2.06
VPS13CQ709C8 AC008277.2-201ENST00000605196 797 ntBASIC2.16□□□□□ -2.06
VPS13CQ709C8 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
VPS13CQ709C8 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC2.16□□□□□ -2.06
VPS13CQ709C8 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
VPS13CQ709C8 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
VPS13CQ709C8 AC000403.1-201ENST00000613696 3585 ntBASIC2.16□□□□□ -2.06
VPS13CQ709C8 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC2.16□□□□□ -2.06
VPS13CQ709C8 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VPS13CQ709C8 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.16□□□□□ -2.06
VPS13CQ709C8 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
VPS13CQ709C8 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VPS13CQ709C8 IDE-202ENST00000371581 4480 ntTSL 2 BASIC2.16□□□□□ -2.06
VPS13CQ709C8 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
VPS13CQ709C8 RNU6-76P-201ENST00000384060 104 ntBASIC2.15□□□□□ -2.06
VPS13CQ709C8 MIR2276-201ENST00000516886 89 ntBASIC2.15□□□□□ -2.06
VPS13CQ709C8 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC2.15□□□□□ -2.06
VPS13CQ709C8 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC2.15□□□□□ -2.06
VPS13CQ709C8 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.15□□□□□ -2.06
VPS13CQ709C8 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.06
VPS13CQ709C8 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
VPS13CQ709C8 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.06
VPS13CQ709C8 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
VPS13CQ709C8 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.06
VPS13CQ709C8 MIR148B-201ENST00000362252 99 ntBASIC2.15□□□□□ -2.07
VPS13CQ709C8 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
VPS13CQ709C8 AL590290.1-201ENST00000405336 380 ntBASIC2.15□□□□□ -2.07
VPS13CQ709C8 HMGB1P15-201ENST00000453854 435 ntBASIC2.15□□□□□ -2.07
VPS13CQ709C8 SETP4-201ENST00000455717 868 ntBASIC2.15□□□□□ -2.07
VPS13CQ709C8 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.15□□□□□ -2.07
VPS13CQ709C8 AC008716.1-201ENST00000511084 513 ntBASIC2.15□□□□□ -2.07
VPS13CQ709C8 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS13CQ709C8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
VPS13CQ709C8 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC2.15□□□□□ -2.07
VPS13CQ709C8 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.15□□□□□ -2.07
VPS13CQ709C8 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VPS13CQ709C8 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
VPS13CQ709C8 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC2.15□□□□□ -2.07
VPS13CQ709C8 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
VPS13CQ709C8 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
VPS13CQ709C8 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.15□□□□□ -2.07
VPS13CQ709C8 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
VPS13CQ709C8 RPL23AP36-201ENST00000413895 458 ntBASIC2.15□□□□□ -2.07
VPS13CQ709C8 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS13CQ709C8 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.15□□□□□ -2.07
VPS13CQ709C8 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.15□□□□□ -2.07
VPS13CQ709C8 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.15□□□□□ -2.07
VPS13CQ709C8 ISCA1P3-201ENST00000577104 373 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms