Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC005154.2-201ENST00000438110 379 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 GDI2P2-201ENST00000445131 608 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 MTND1P27-201ENST00000451117 902 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 snoU109.1-201ENST00000459339 135 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 AC091180.1-201ENST00000462104 372 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 AP000942.1-201ENST00000463969 747 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 RPL12P20-201ENST00000475538 479 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 RNA5SP392-201ENST00000516905 112 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 RNU6-1003P-201ENST00000517099 105 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 PAICSP4-201ENST00000517543 1253 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 AC022878.1-201ENST00000530684 149 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 SETP2-201ENST00000553886 926 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 AC107954.1-201ENST00000565906 727 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 MIR5697-201ENST00000578045 78 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 AL669831.4-202ENST00000590817 238 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 RPL26P30-202ENST00000602923 645 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 AL359999.1-201ENST00000604513 294 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 AC009237.17-201ENST00000618111 748 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 CR381572.1-201ENST00000625098 102 ntBASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
CCDC144BQ3MJ40 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 MAPK10-263ENST00000641052 4307 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 RPL32P3-201ENST00000359025 275 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 RNU6-853P-201ENST00000364306 107 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 RNU6-1119P-201ENST00000384349 108 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 HMGN1P14-201ENST00000412459 517 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 BX510359.2-201ENST00000417920 305 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AL445669.1-201ENST00000426743 755 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 OR2B7P-201ENST00000429302 934 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AL033528.1-201ENST00000453780 140 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 SNORD42A-201ENST00000459584 64 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 RPS17P2-201ENST00000461663 408 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 HMGB1P36-201ENST00000487709 576 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AC111000.3-201ENST00000508057 576 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 RNU4-60P-201ENST00000517239 135 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 RN7SKP92-201ENST00000517266 244 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AGGF1P4-201ENST00000568249 801 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AC087683.1-201ENST00000591187 441 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 BNIP3P8-201ENST00000597863 560 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 IGHV3-29-201ENST00000604817 344 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 MIR6853-201ENST00000619642 74 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AC091925.2-201ENST00000625059 256 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 AC015813.6-201ENST00000624409 5808 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 TEX21P-201ENST00000447107 1476 ntBASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CCDC144BQ3MJ40 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 MTND4P26-201ENST00000415971 1359 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AC025031.4-201ENST00000621248 3271 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 MTND5P3-201ENST00000438536 1800 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 RNU6-97P-201ENST00000363387 104 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 Y_RNA.234-201ENST00000364409 97 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 SNORA75-201ENST00000384158 137 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 RNU6-809P-201ENST00000384461 107 ntBASIC5.56□□□□□ -1.52
CCDC144BQ3MJ40 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms