Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 RN7SKP67-201ENST00000515905 235 ntBASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 Y_RNA.674-201ENST00000516362 113 ntBASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 SNORA40.15-201ENST00000516884 107 ntBASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 AC105224.1-201ENST00000587055 421 ntBASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 AP001485.1-201ENST00000604799 199 ntBASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 AC093799.2-201ENST00000610062 578 ntBASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 AC005344.1-201ENST00000613391 459 ntBASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 MIR7159-201ENST00000620587 66 ntBASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 AC092070.2-203ENST00000598377 3644 ntBASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 AL359976.1-201ENST00000418655 3528 ntBASIC6.53□□□□□ -1.36
CTC1Q2NKJ3 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.36
CTC1Q2NKJ3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.36
CTC1Q2NKJ3 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.36
CTC1Q2NKJ3 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 AC062022.1-201ENST00000451026 1684 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 Y_RNA.22-201ENST00000362492 102 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 Y_RNA.200-201ENST00000364018 102 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 RNA5SP36-201ENST00000410197 133 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 AC137499.1-201ENST00000427602 88 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 C4BPAP2-201ENST00000428434 478 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 RBMY2TP-201ENST00000451162 947 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 RN7SL610P-201ENST00000463845 291 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 RPL31P50-201ENST00000471002 296 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 AL122020.1-201ENST00000472287 459 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 RNU6-397P-201ENST00000516226 104 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 SNORA25.14-201ENST00000516481 132 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 CYCSP22-201ENST00000517555 339 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 COX6B1P6-201ENST00000522347 255 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 CARD16-203ENST00000525374 503 ntTSL 3 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 SETP2-201ENST00000553886 926 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 FAM27E4-201ENST00000605259 342 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 AC010424.2-201ENST00000607594 443 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 AL136131.3-201ENST00000607600 188 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 AC244517.1-201ENST00000606030 2086 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 AC010624.4-201ENST00000597606 1351 ntBASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
CTC1Q2NKJ3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AL161912.4-201ENST00000623889 2468 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 MIR375-201ENST00000362103 64 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 RNU6-562P-201ENST00000362731 107 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 RNY1-201ENST00000364228 113 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 RNU6-744P-201ENST00000365557 107 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 RNU6-1316P-201ENST00000384242 108 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 MTATP6P16-201ENST00000434543 526 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AC004383.1-201ENST00000438135 289 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AC002381.1-201ENST00000447049 280 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 NDUFB1P2-201ENST00000449477 176 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AL355032.1-201ENST00000472981 438 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 RN7SL466P-201ENST00000497546 295 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 AC231760.1-201ENST00000498002 260 ntBASIC6.51□□□□□ -1.37
CTC1Q2NKJ3 TMEM251P1-201ENST00000503717 318 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms