Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 HMGB3P21-201ENST00000452483 547 ntBASIC5.09□□□□□ -1.59
GABREP78334 AC092647.2-201ENST00000452998 253 ntBASIC5.09□□□□□ -1.59
GABREP78334 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.09□□□□□ -1.59
GABREP78334 AC104308.1-201ENST00000454621 333 ntBASIC5.09□□□□□ -1.59
GABREP78334 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.09□□□□□ -1.59
GABREP78334 RPL37P6-202ENST00000464216 403 ntBASIC5.09□□□□□ -1.59
GABREP78334 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC5.09□□□□□ -1.59
GABREP78334 OR5H5P-201ENST00000503164 928 ntBASIC5.09□□□□□ -1.59
GABREP78334 AC145146.2-202ENST00000508118 326 ntTSL 3 BASIC5.09□□□□□ -1.59
GABREP78334 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.09□□□□□ -1.59
GABREP78334 IGKV2D-36-201ENST00000518643 226 ntBASIC5.09□□□□□ -1.59
GABREP78334 AC136777.2-201ENST00000522979 358 ntBASIC5.09□□□□□ -1.59
GABREP78334 BNIP3P1-201ENST00000547295 580 ntBASIC5.09□□□□□ -1.59
GABREP78334 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC5.09□□□□□ -1.59
GABREP78334 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC5.09□□□□□ -1.59
GABREP78334 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.09□□□□□ -1.59
GABREP78334 AC009117.1-201ENST00000563948 554 ntBASIC5.09□□□□□ -1.59
GABREP78334 RPL12P25-202ENST00000598100 674 ntBASIC5.09□□□□□ -1.59
GABREP78334 AC068790.5-201ENST00000602741 355 ntBASIC5.09□□□□□ -1.59
GABREP78334 AP002360.3-201ENST00000607673 710 ntBASIC5.09□□□□□ -1.59
GABREP78334 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.09□□□□□ -1.59
GABREP78334 DUXAP9-208ENST00000622815 614 ntBASIC5.09□□□□□ -1.59
GABREP78334 MIR4496-201ENST00000635896 61 ntBASIC5.09□□□□□ -1.59
GABREP78334 AC000123.3-201ENST00000624029 4975 ntBASIC5.09□□□□□ -1.59
GABREP78334 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
GABREP78334 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
GABREP78334 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
GABREP78334 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.6
GABREP78334 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.6
GABREP78334 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
GABREP78334 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
GABREP78334 AC074029.4-201ENST00000624796 1859 ntBASIC5.09□□□□□ -1.6
GABREP78334 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
GABREP78334 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
GABREP78334 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GABREP78334 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
GABREP78334 AL592182.3-201ENST00000642132 3304 ntBASIC5.08□□□□□ -1.6
GABREP78334 AC068870.1-201ENST00000563737 2455 ntBASIC5.08□□□□□ -1.6
GABREP78334 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GABREP78334 THAP12P4-201ENST00000528321 2266 ntBASIC5.08□□□□□ -1.6
GABREP78334 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GABREP78334 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
GABREP78334 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GABREP78334 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.08□□□□□ -1.6
GABREP78334 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GABREP78334 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
GABREP78334 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GABREP78334 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GABREP78334 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.08□□□□□ -1.6
GABREP78334 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
GABREP78334 OR52B1P-201ENST00000316506 909 ntBASIC5.08□□□□□ -1.6
GABREP78334 AL121886.1-201ENST00000358609 435 ntBASIC5.08□□□□□ -1.6
GABREP78334 RNU4-1-201ENST00000363925 141 ntBASIC5.08□□□□□ -1.6
GABREP78334 RNU6-534P-201ENST00000364877 106 ntBASIC5.08□□□□□ -1.6
GABREP78334 RNU6-877P-201ENST00000383868 107 ntBASIC5.08□□□□□ -1.6
GABREP78334 MIR600-201ENST00000385007 98 ntBASIC5.08□□□□□ -1.6
GABREP78334 MT-TC-201ENST00000387405 66 ntBASIC5.08□□□□□ -1.6
GABREP78334 RNU6-876P-201ENST00000391295 104 ntBASIC5.08□□□□□ -1.6
GABREP78334 U3.29-201ENST00000391296 212 ntBASIC5.08□□□□□ -1.6
GABREP78334 FGF7P8-201ENST00000402994 292 ntBASIC5.08□□□□□ -1.6
GABREP78334 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.08□□□□□ -1.6
GABREP78334 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.08□□□□□ -1.6
GABREP78334 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC5.08□□□□□ -1.6
GABREP78334 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.08□□□□□ -1.6
GABREP78334 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC5.08□□□□□ -1.6
GABREP78334 AL121601.2-201ENST00000438019 707 ntBASIC5.08□□□□□ -1.6
GABREP78334 Z95327.1-201ENST00000446082 482 ntBASIC5.08□□□□□ -1.6
GABREP78334 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC5.08□□□□□ -1.6
GABREP78334 AL353691.1-201ENST00000451332 387 ntBASIC5.08□□□□□ -1.6
GABREP78334 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC5.08□□□□□ -1.6
GABREP78334 GLUD1P3-202ENST00000508551 200 ntBASIC5.08□□□□□ -1.6
GABREP78334 RNU6-27P-201ENST00000516146 107 ntBASIC5.08□□□□□ -1.6
GABREP78334 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.08□□□□□ -1.6
GABREP78334 AC100784.1-201ENST00000522790 310 ntBASIC5.08□□□□□ -1.6
GABREP78334 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.08□□□□□ -1.6
GABREP78334 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC5.08□□□□□ -1.6
GABREP78334 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.08□□□□□ -1.6
GABREP78334 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.08□□□□□ -1.6
GABREP78334 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC5.08□□□□□ -1.6
GABREP78334 MIR3146-201ENST00000580367 79 ntBASIC5.08□□□□□ -1.6
GABREP78334 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.08□□□□□ -1.6
GABREP78334 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.08□□□□□ -1.6
GABREP78334 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GABREP78334 AC012409.3-201ENST00000611343 981 ntBASIC5.08□□□□□ -1.6
GABREP78334 AC025253.1-201ENST00000613623 543 ntBASIC5.08□□□□□ -1.6
GABREP78334 AL590099.1-201ENST00000615276 138 ntBASIC5.08□□□□□ -1.6
GABREP78334 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC5.08□□□□□ -1.6
GABREP78334 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC5.08□□□□□ -1.6
GABREP78334 AC112204.3-201ENST00000623822 332 ntBASIC5.08□□□□□ -1.6
GABREP78334 AL159972.1-201ENST00000625150 448 ntBASIC5.08□□□□□ -1.6
GABREP78334 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.08□□□□□ -1.6
GABREP78334 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.08□□□□□ -1.6
GABREP78334 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
GABREP78334 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
GABREP78334 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
GABREP78334 AC009902.3-201ENST00000606235 2172 ntBASIC5.08□□□□□ -1.6
GABREP78334 IQCB2P-201ENST00000401788 1633 ntBASIC5.08□□□□□ -1.6
GABREP78334 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
GABREP78334 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
GABREP78334 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms