Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 RAB28P1-201ENST00000411517 641 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN20P56880 AC092647.1-201ENST00000420654 287 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN20P56880 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN20P56880 AC008065.1-201ENST00000428525 348 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN20P56880 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN20P56880 MTND4P6-201ENST00000438297 472 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN20P56880 AC097262.1-201ENST00000452559 548 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN20P56880 RPL7P22-201ENST00000466005 733 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 SYPL1P1-201ENST00000473622 768 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 AC146944.2-203ENST00000502493 354 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN20P56880 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN20P56880 AC117522.2-201ENST00000510049 657 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 AC139495.1-202ENST00000513164 354 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 RNU6-759P-201ENST00000516740 103 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN20P56880 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.9□□□□□ -1.79
CLDN20P56880 AC090819.1-201ENST00000523800 1111 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 DEFB131D-201ENST00000526803 184 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN20P56880 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.9□□□□□ -1.79
CLDN20P56880 HNRNPCP4-201ENST00000571636 900 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.9□□□□□ -1.79
CLDN20P56880 MIR3939-201ENST00000582614 106 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN20P56880 AC010620.1-201ENST00000601088 1102 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 ARF4P1-201ENST00000605447 541 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 AC124312.4-201ENST00000605533 310 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 AC008083.4-201ENST00000615076 444 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN20P56880 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.9□□□□□ -1.79
CLDN20P56880 AC007546.1-201ENST00000619452 559 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 AP003399.1-201ENST00000637534 361 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 OR52H1-202ENST00000641796 1061 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 AL356489.2-201ENST00000566968 3528 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN20P56880 AC011477.1-204ENST00000623416 1325 ntBASIC3.9□□□□□ -1.79
CLDN20P56880 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
CLDN20P56880 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN20P56880 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.9□□□□□ -1.79
CLDN20P56880 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN20P56880 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN20P56880 MTRNR2L13-201ENST00000604093 1445 ntAPPRIS P1 BASIC3.89□□□□□ -1.79
CLDN20P56880 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CLDN20P56880 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
CLDN20P56880 AL592437.2-201ENST00000421655 2434 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 Y_RNA.18-201ENST00000362461 102 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN20P56880 SNORA51.6-201ENST00000384151 125 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN20P56880 RPL23AP26-201ENST00000412728 464 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 RPS15AP38-201ENST00000413110 372 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN20P56880 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN20P56880 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN20P56880 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN20P56880 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN20P56880 RPL7P1-201ENST00000468161 747 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 RPL7P9-201ENST00000468715 747 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 AC010618.1-201ENST00000469924 477 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 AC087385.1-201ENST00000475062 312 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 AC041039.1-201ENST00000485656 536 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 AC114981.1-201ENST00000503897 678 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN20P56880 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.89□□□□□ -1.79
CLDN20P56880 AC017037.1-201ENST00000508460 471 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 AL592156.1-201ENST00000508758 304 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 XKRY-201ENST00000510392 1100 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 AC006499.2-201ENST00000513470 337 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 AC016065.2-201ENST00000514530 444 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC3.89□□□□□ -1.79
CLDN20P56880 RN7SKP122-201ENST00000515923 296 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC3.89□□□□□ -1.79
CLDN20P56880 AL352979.3-201ENST00000553515 247 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 AC007954.1-201ENST00000554198 494 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
CLDN20P56880 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN20P56880 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN20P56880 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.89□□□□□ -1.79
CLDN20P56880 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC3.89□□□□□ -1.79
CLDN20P56880 RPL23AP97-201ENST00000568955 471 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 AC010738.1-201ENST00000604970 987 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CLDN20P56880 AC231657.1-201ENST00000624313 397 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.89□□□□□ -1.79
CLDN20P56880 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
CLDN20P56880 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN20P56880 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN20P56880 MTCO1P14-201ENST00000441695 1559 ntBASIC3.89□□□□□ -1.79
CLDN20P56880 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.89□□□□□ -1.79
CLDN20P56880 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.88□□□□□ -1.79
CLDN20P56880 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLDN20P56880 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
CLDN20P56880 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms