Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNU5A-4P-201ENST00000516588 111 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCN3P51790 AC022695.1-201ENST00000522089 237 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 AC007991.1-201ENST00000522680 631 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 OR4A12P-201ENST00000530847 918 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCN3P51790 GNRHR2P1-201ENST00000555315 631 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCN3P51790 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.28□□□□□ -1.72
CLCN3P51790 MIR4444-1-201ENST00000581696 74 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 MIR4444-2-201ENST00000584390 74 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.28□□□□□ -1.72
CLCN3P51790 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.28□□□□□ -1.72
CLCN3P51790 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCN3P51790 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.28□□□□□ -1.72
CLCN3P51790 AC005332.6-201ENST00000613178 446 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CLCN3P51790 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCN3P51790 ZNF876P-202ENST00000398732 1485 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 AL049555.1-201ENST00000562834 1933 ntBASIC4.28□□□□□ -1.72
CLCN3P51790 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CLCN3P51790 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCN3P51790 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCN3P51790 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCN3P51790 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCN3P51790 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCN3P51790 SNORA73.2-201ENST00000364946 201 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCN3P51790 AC092634.6-201ENST00000418558 192 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.27□□□□□ -1.73
CLCN3P51790 NPM1P34-201ENST00000428821 893 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 COX7BP2-201ENST00000437976 242 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 RPL23AP76-201ENST00000441860 458 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCN3P51790 VN1R34P-201ENST00000447387 883 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 RPL7P31-201ENST00000450192 724 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 USP9YP25-201ENST00000457708 443 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 snoU13.7-201ENST00000459220 104 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 AC010469.1-201ENST00000463864 576 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.27□□□□□ -1.73
CLCN3P51790 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.27□□□□□ -1.73
CLCN3P51790 SNX5P1-201ENST00000505757 1041 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 AC008837.2-201ENST00000513076 418 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 AC018797.3-201ENST00000513388 1241 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 NDUFB4P12-201ENST00000513465 390 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 CA1-215ENST00000522389 551 ntTSL 3 BASIC4.27□□□□□ -1.73
CLCN3P51790 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
CLCN3P51790 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CLCN3P51790 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCN3P51790 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.27□□□□□ -1.73
CLCN3P51790 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.27□□□□□ -1.73
CLCN3P51790 MTCYBP28-201ENST00000566728 1132 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCN3P51790 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.27□□□□□ -1.73
CLCN3P51790 BNIP3P33-201ENST00000598912 569 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 AL353778.1-201ENST00000603149 408 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 AC015813.4-201ENST00000610469 179 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC4.27□□□□□ -1.73
CLCN3P51790 AC091304.6-201ENST00000619761 202 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 AC073348.1-201ENST00000623002 331 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCN3P51790 AC011266.1-201ENST00000624119 3569 ntBASIC4.27□□□□□ -1.73
CLCN3P51790 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLCN3P51790 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCN3P51790 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLCN3P51790 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.27□□□□□ -1.73
CLCN3P51790 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CLCN3P51790 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
CLCN3P51790 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLCN3P51790 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CLCN3P51790 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCN3P51790 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCN3P51790 ZNF962P-201ENST00000443465 3140 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCN3P51790 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CLCN3P51790 RNU6-1214P-201ENST00000363650 109 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 MIR506-201ENST00000384998 124 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CLCN3P51790 AL139247.1-201ENST00000422768 325 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCN3P51790 AL591419.1-201ENST00000427423 339 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 AC005345.1-201ENST00000431868 217 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCN3P51790 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.26□□□□□ -1.73
CLCN3P51790 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCN3P51790 AC034236.1-201ENST00000469891 373 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 ACTG1P13-201ENST00000486987 1043 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 RPL31P61-201ENST00000496160 376 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCN3P51790 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCN3P51790 WBP1LP4-201ENST00000505043 344 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 AC010486.2-201ENST00000505572 483 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 AC010486.3-201ENST00000511602 785 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 MTCO1P30-201ENST00000515244 580 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 RNU6-1261P-201ENST00000517194 104 ntBASIC4.26□□□□□ -1.73
CLCN3P51790 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCN3P51790 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CLCN3P51790 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.26□□□□□ -1.73
CLCN3P51790 GTF2IP22-201ENST00000554443 182 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 241.6 ms