Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC073387.1-201ENST00000453261 709 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 MTCO3P16-201ENST00000454456 754 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 AC244505.3-201ENST00000454598 187 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGCLP35914 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HMGCLP35914 RN7SL330P-201ENST00000469709 307 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 RN7SL594P-201ENST00000470590 287 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.57□□□□□ -1.84
HMGCLP35914 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HMGCLP35914 RPL21P103-201ENST00000479921 488 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 AC073522.1-201ENST00000483312 377 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 AC005726.1-201ENST00000494679 427 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGCLP35914 UBE2V1P12-201ENST00000503954 474 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGCLP35914 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGCLP35914 AC096571.1-202ENST00000506634 735 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC3.57□□□□□ -1.84
HMGCLP35914 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGCLP35914 RNU6-415P-201ENST00000516252 97 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 HIGD1AP10-201ENST00000527837 282 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.57□□□□□ -1.84
HMGCLP35914 MED28P5-201ENST00000528254 438 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HMGCLP35914 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGCLP35914 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.57□□□□□ -1.84
HMGCLP35914 GTF2IP22-201ENST00000554443 182 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 AL121576.1-201ENST00000556055 276 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGCLP35914 ZNF971P-201ENST00000562068 1249 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGCLP35914 MIR4760-201ENST00000585040 80 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HMGCLP35914 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGCLP35914 LLPHP1-201ENST00000603571 367 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 AC010591.1-201ENST00000603941 649 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 AP003117.2-201ENST00000606010 545 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGCLP35914 AC073073.2-201ENST00000609827 2578 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGCLP35914 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGCLP35914 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 AL161637.1-201ENST00000622380 412 ntBASIC3.57□□□□□ -1.84
HMGCLP35914 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGCLP35914 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HMGCLP35914 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
HMGCLP35914 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HMGCLP35914 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGCLP35914 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGCLP35914 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HMGCLP35914 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGCLP35914 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGCLP35914 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGCLP35914 MCTS2P-201ENST00000394552 546 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 AC069218.2-201ENST00000411665 344 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCLP35914 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCLP35914 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCLP35914 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCLP35914 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCLP35914 TPTE2P6-202ENST00000445572 1007 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 AC005002.1-201ENST00000447458 540 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCLP35914 FTH1P2-201ENST00000466086 412 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 RPL23AP14-201ENST00000468281 468 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.56□□□□□ -1.84
HMGCLP35914 AC015724.1-201ENST00000478577 156 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 AC126121.1-201ENST00000482313 553 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 AC106707.2-201ENST00000484182 374 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCLP35914 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCLP35914 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCLP35914 AC008885.2-201ENST00000509506 930 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 TPT1P8-201ENST00000510120 555 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 RNU2-27P-201ENST00000516185 142 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 HMGB1P23-201ENST00000518743 568 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 MTND2P32-201ENST00000521584 1038 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCLP35914 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCLP35914 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCLP35914 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGCLP35914 MTND1P8-201ENST00000571424 950 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.56□□□□□ -1.84
HMGCLP35914 AC006116.10-201ENST00000591836 581 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 RPAP2P1-201ENST00000603626 1168 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGCLP35914 AC022960.3-201ENST00000619794 441 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGCLP35914 AC009093.8-201ENST00000641769 292 ntBASIC3.56□□□□□ -1.84
HMGCLP35914 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGCLP35914 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
HMGCLP35914 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCLP35914 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCLP35914 RNU4-51P-201ENST00000364206 140 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 SNORA72.3-201ENST00000365074 132 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCLP35914 AL359837.1-201ENST00000381357 287 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 SNORA51.12-201ENST00000384448 134 ntBASIC3.55□□□□□ -1.84
HMGCLP35914 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGCLP35914 PTMAP2-201ENST00000397627 327 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms