Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
XPAP23025 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
XPAP23025 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.95□□□□□ -1.62
XPAP23025 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
XPAP23025 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
XPAP23025 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
XPAP23025 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
XPAP23025 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
XPAP23025 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
XPAP23025 Y_RNA.256-201ENST00000364594 104 ntBASIC4.94□□□□□ -1.62
XPAP23025 RNY4P34-201ENST00000364779 95 ntBASIC4.94□□□□□ -1.62
XPAP23025 RNU4-12P-201ENST00000365233 139 ntBASIC4.94□□□□□ -1.62
XPAP23025 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.94□□□□□ -1.62
XPAP23025 MIR181A1-201ENST00000385026 110 ntBASIC4.94□□□□□ -1.62
XPAP23025 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
XPAP23025 RPS3AP9-201ENST00000417027 792 ntBASIC4.94□□□□□ -1.62
XPAP23025 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.94□□□□□ -1.62
XPAP23025 AC096632.1-201ENST00000427395 310 ntBASIC4.94□□□□□ -1.62
XPAP23025 AL358934.1-201ENST00000432346 324 ntBASIC4.94□□□□□ -1.62
XPAP23025 AC092162.1-201ENST00000432828 434 ntBASIC4.94□□□□□ -1.62
XPAP23025 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC4.94□□□□□ -1.62
XPAP23025 CEACAMP9-201ENST00000442990 513 ntBASIC4.94□□□□□ -1.62
XPAP23025 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4.94□□□□□ -1.62
XPAP23025 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.94□□□□□ -1.62
XPAP23025 AC245028.2-201ENST00000458673 253 ntBASIC4.94□□□□□ -1.62
XPAP23025 AC063943.1-201ENST00000465434 453 ntBASIC4.94□□□□□ -1.62
XPAP23025 AC092324.1-201ENST00000468671 324 ntBASIC4.94□□□□□ -1.62
XPAP23025 AC087879.1-201ENST00000474343 374 ntBASIC4.94□□□□□ -1.62
XPAP23025 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.94□□□□□ -1.62
XPAP23025 AC005726.1-201ENST00000494679 427 ntBASIC4.94□□□□□ -1.62
XPAP23025 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
XPAP23025 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
XPAP23025 AC024589.1-201ENST00000512207 263 ntBASIC4.94□□□□□ -1.62
XPAP23025 MTCO2P4-201ENST00000517968 247 ntBASIC4.94□□□□□ -1.62
XPAP23025 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.94□□□□□ -1.62
XPAP23025 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.94□□□□□ -1.62
XPAP23025 AP006245.2-201ENST00000522004 300 ntBASIC4.94□□□□□ -1.62
XPAP23025 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.94□□□□□ -1.62
XPAP23025 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.94□□□□□ -1.62
XPAP23025 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.94□□□□□ -1.62
XPAP23025 LSM6P2-201ENST00000552208 177 ntBASIC4.94□□□□□ -1.62
XPAP23025 MIR3667-201ENST00000581025 74 ntBASIC4.94□□□□□ -1.62
XPAP23025 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.94□□□□□ -1.62
XPAP23025 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC4.94□□□□□ -1.62
XPAP23025 HMGN1P30-201ENST00000589286 268 ntBASIC4.94□□□□□ -1.62
XPAP23025 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.94□□□□□ -1.62
XPAP23025 AC020910.3-201ENST00000603701 874 ntBASIC4.94□□□□□ -1.62
XPAP23025 COX6CP4-201ENST00000605798 228 ntBASIC4.94□□□□□ -1.62
XPAP23025 AC103710.1-201ENST00000610003 901 ntBASIC4.94□□□□□ -1.62
XPAP23025 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.94□□□□□ -1.62
XPAP23025 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.94□□□□□ -1.62
XPAP23025 AL356321.1-201ENST00000621360 228 ntBASIC4.94□□□□□ -1.62
XPAP23025 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.94□□□□□ -1.62
XPAP23025 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.94□□□□□ -1.62
XPAP23025 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.94□□□□□ -1.62
XPAP23025 AC110994.2-201ENST00000635481 492 ntBASIC4.94□□□□□ -1.62
XPAP23025 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
XPAP23025 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
XPAP23025 KPNA2P2-201ENST00000419546 1489 ntBASIC4.94□□□□□ -1.62
XPAP23025 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.94□□□□□ -1.62
XPAP23025 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.93□□□□□ -1.62
XPAP23025 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
XPAP23025 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
XPAP23025 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
XPAP23025 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
XPAP23025 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
XPAP23025 RNU5E-4P-201ENST00000364931 120 ntBASIC4.93□□□□□ -1.62
XPAP23025 Y_RNA.372-201ENST00000365599 102 ntBASIC4.93□□□□□ -1.62
XPAP23025 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.93□□□□□ -1.62
XPAP23025 TBCAP2-201ENST00000416175 326 ntBASIC4.93□□□□□ -1.62
XPAP23025 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.93□□□□□ -1.62
XPAP23025 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.93□□□□□ -1.62
XPAP23025 USP9YP36-201ENST00000424581 829 ntBASIC4.93□□□□□ -1.62
XPAP23025 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.93□□□□□ -1.62
XPAP23025 DPPA2P1-201ENST00000428060 556 ntBASIC4.93□□□□□ -1.62
XPAP23025 AL360081.1-201ENST00000428299 555 ntBASIC4.93□□□□□ -1.62
XPAP23025 AL451074.3-201ENST00000437709 472 ntBASIC4.93□□□□□ -1.62
XPAP23025 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC4.93□□□□□ -1.62
XPAP23025 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.93□□□□□ -1.62
XPAP23025 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.93□□□□□ -1.62
XPAP23025 AP000542.1-201ENST00000448473 371 ntBASIC4.93□□□□□ -1.62
XPAP23025 AC005297.2-201ENST00000450430 606 ntBASIC4.93□□□□□ -1.62
XPAP23025 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.93□□□□□ -1.62
XPAP23025 snoU13.7-201ENST00000459220 104 ntBASIC4.93□□□□□ -1.62
XPAP23025 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.93□□□□□ -1.62
XPAP23025 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC4.93□□□□□ -1.62
XPAP23025 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.93□□□□□ -1.62
XPAP23025 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.93□□□□□ -1.62
XPAP23025 AC108078.1-201ENST00000508073 725 ntBASIC4.93□□□□□ -1.62
XPAP23025 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
XPAP23025 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC4.93□□□□□ -1.62
XPAP23025 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.93□□□□□ -1.62
XPAP23025 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.93□□□□□ -1.62
XPAP23025 AC040958.1-201ENST00000561102 201 ntBASIC4.93□□□□□ -1.62
XPAP23025 MIR548S-201ENST00000581352 82 ntBASIC4.93□□□□□ -1.62
XPAP23025 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC4.93□□□□□ -1.62
XPAP23025 BBIP1P1-201ENST00000602999 279 ntBASIC4.93□□□□□ -1.62
XPAP23025 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.93□□□□□ -1.62
XPAP23025 AC068722.2-201ENST00000618734 544 ntBASIC4.93□□□□□ -1.62
XPAP23025 AC136475.10-201ENST00000620253 385 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms