Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 VN1R90P-201ENST00000595717 726 ntBASIC4.39□□□□□ -1.71
MMP3P08254 AC103881.1-201ENST00000603476 538 ntBASIC4.39□□□□□ -1.71
MMP3P08254 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.39□□□□□ -1.71
MMP3P08254 AL163642.2-201ENST00000604722 1019 ntBASIC4.39□□□□□ -1.71
MMP3P08254 OR2AS2P-201ENST00000606902 342 ntBASIC4.39□□□□□ -1.71
MMP3P08254 AL355816.1-201ENST00000607951 118 ntBASIC4.39□□□□□ -1.71
MMP3P08254 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.39□□□□□ -1.71
MMP3P08254 AC026368.1-201ENST00000614934 690 ntBASIC4.39□□□□□ -1.71
MMP3P08254 AC079248.2-201ENST00000623779 326 ntBASIC4.39□□□□□ -1.71
MMP3P08254 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.39□□□□□ -1.71
MMP3P08254 MAPK10-372ENST00000641954 3413 ntBASIC4.39□□□□□ -1.71
MMP3P08254 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MMP3P08254 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
MMP3P08254 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
MMP3P08254 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MMP3P08254 AC092079.1-201ENST00000558620 1985 ntBASIC4.38□□□□□ -1.71
MMP3P08254 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.38□□□□□ -1.71
MMP3P08254 AL512646.1-201ENST00000269395 1077 ntBASIC4.38□□□□□ -1.71
MMP3P08254 RNU6-1151P-201ENST00000384684 107 ntBASIC4.38□□□□□ -1.71
MMP3P08254 AL021407.1-201ENST00000404531 386 ntBASIC4.38□□□□□ -1.71
MMP3P08254 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MMP3P08254 AC093578.1-201ENST00000415219 368 ntBASIC4.38□□□□□ -1.71
MMP3P08254 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.38□□□□□ -1.71
MMP3P08254 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.38□□□□□ -1.71
MMP3P08254 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.38□□□□□ -1.71
MMP3P08254 MTCO2P25-201ENST00000447065 681 ntBASIC4.38□□□□□ -1.71
MMP3P08254 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.38□□□□□ -1.71
MMP3P08254 PRSS3P4-201ENST00000453323 162 ntBASIC4.38□□□□□ -1.71
MMP3P08254 RPS15AP1-201ENST00000457423 391 ntBASIC4.38□□□□□ -1.71
MMP3P08254 PNPLA4P1-201ENST00000458328 305 ntBASIC4.38□□□□□ -1.71
MMP3P08254 RN7SL271P-201ENST00000487601 295 ntBASIC4.38□□□□□ -1.71
MMP3P08254 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.38□□□□□ -1.71
MMP3P08254 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.38□□□□□ -1.71
MMP3P08254 AC111000.2-201ENST00000507775 550 ntBASIC4.38□□□□□ -1.71
MMP3P08254 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.38□□□□□ -1.71
MMP3P08254 RNY4P37-201ENST00000516225 96 ntBASIC4.38□□□□□ -1.71
MMP3P08254 AC105185.1-201ENST00000518705 535 ntBASIC4.38□□□□□ -1.71
MMP3P08254 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC4.38□□□□□ -1.71
MMP3P08254 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.38□□□□□ -1.71
MMP3P08254 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.38□□□□□ -1.71
MMP3P08254 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.38□□□□□ -1.71
MMP3P08254 CCNG2P1-201ENST00000549521 1000 ntBASIC4.38□□□□□ -1.71
MMP3P08254 AC125611.1-201ENST00000549563 229 ntBASIC4.38□□□□□ -1.71
MMP3P08254 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC4.38□□□□□ -1.71
MMP3P08254 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.38□□□□□ -1.71
MMP3P08254 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.38□□□□□ -1.71
MMP3P08254 AC090616.2-202ENST00000584248 222 ntBASIC4.38□□□□□ -1.71
MMP3P08254 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.38□□□□□ -1.71
MMP3P08254 MIR4999-201ENST00000585029 91 ntBASIC4.38□□□□□ -1.71
MMP3P08254 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.38□□□□□ -1.71
MMP3P08254 VN1R82P-201ENST00000601481 356 ntBASIC4.38□□□□□ -1.71
MMP3P08254 AC010200.2-201ENST00000605098 235 ntBASIC4.38□□□□□ -1.71
MMP3P08254 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.38□□□□□ -1.71
MMP3P08254 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.38□□□□□ -1.71
MMP3P08254 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
MMP3P08254 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.38□□□□□ -1.71
MMP3P08254 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
MMP3P08254 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
MMP3P08254 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.38□□□□□ -1.71
MMP3P08254 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
MMP3P08254 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.38□□□□□ -1.71
MMP3P08254 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.37□□□□□ -1.71
MMP3P08254 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
MMP3P08254 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
MMP3P08254 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
MMP3P08254 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.37□□□□□ -1.71
MMP3P08254 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.37□□□□□ -1.71
MMP3P08254 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
MMP3P08254 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.37□□□□□ -1.71
MMP3P08254 RNA5SP119-201ENST00000362715 117 ntBASIC4.37□□□□□ -1.71
MMP3P08254 RNU6-1066P-201ENST00000363573 105 ntBASIC4.37□□□□□ -1.71
MMP3P08254 Y_RNA.318-201ENST00000365131 97 ntBASIC4.37□□□□□ -1.71
MMP3P08254 SNORA5A-201ENST00000384111 134 ntBASIC4.37□□□□□ -1.71
MMP3P08254 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
MMP3P08254 MIR1251-201ENST00000408552 70 ntBASIC4.37□□□□□ -1.71
MMP3P08254 RNU2-65P-201ENST00000410162 185 ntBASIC4.37□□□□□ -1.71
MMP3P08254 RPL7AP73-201ENST00000413490 353 ntBASIC4.37□□□□□ -1.71
MMP3P08254 FCF1P2-201ENST00000415284 583 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC4.37□□□□□ -1.71
MMP3P08254 MTND4P20-201ENST00000424125 869 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC091286.1-201ENST00000431233 461 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.37□□□□□ -1.71
MMP3P08254 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.37□□□□□ -1.71
MMP3P08254 RPS25P9-201ENST00000435591 252 ntBASIC4.37□□□□□ -1.71
MMP3P08254 YWHAZP8-201ENST00000436935 731 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC083863.1-201ENST00000438811 231 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC4.37□□□□□ -1.71
MMP3P08254 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC4.37□□□□□ -1.71
MMP3P08254 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.37□□□□□ -1.71
MMP3P08254 MTND2P4-201ENST00000445034 1004 ntBASIC4.37□□□□□ -1.71
MMP3P08254 GEMIN8P3-201ENST00000445417 720 ntBASIC4.37□□□□□ -1.71
MMP3P08254 MTCYBP3-201ENST00000445588 1137 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.37□□□□□ -1.71
MMP3P08254 NDUFA5P7-201ENST00000452914 242 ntBASIC4.37□□□□□ -1.71
MMP3P08254 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.37□□□□□ -1.71
MMP3P08254 AC010307.1-201ENST00000467206 836 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC022795.1-201ENST00000473808 480 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC006517.1-201ENST00000480485 328 ntBASIC4.37□□□□□ -1.71
MMP3P08254 NCOR1P1-202ENST00000486162 291 ntBASIC4.37□□□□□ -1.71
MMP3P08254 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms