Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 RNU6-754P-201ENST00000391166 107 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 UBE2V1P2-201ENST00000397758 440 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFAP04085 RNA5SP156-201ENST00000410250 110 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 RN7SKP159-201ENST00000410657 292 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 PMCHL1-202ENST00000423102 261 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.68□□□□□ -1.5
PDGFAP04085 RPS26P47-201ENST00000427219 348 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 CALM2P2-201ENST00000428512 440 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC5.68□□□□□ -1.5
PDGFAP04085 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.68□□□□□ -1.5
PDGFAP04085 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFAP04085 AC005019.1-201ENST00000436455 431 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 HMGB3P22-202ENST00000451823 572 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 BX276092.4-201ENST00000452056 248 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.68□□□□□ -1.5
PDGFAP04085 AC025164.1-201ENST00000496249 478 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.68□□□□□ -1.5
PDGFAP04085 AC008638.1-201ENST00000506035 866 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 AC098591.2-201ENST00000510152 315 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 SMURF2P1-201ENST00000514992 481 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 RNA5SP362-201ENST00000516048 118 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 IGKV1D-22-201ENST00000518953 324 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 COPS8P3-201ENST00000526024 482 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC5.68□□□□□ -1.5
PDGFAP04085 AC018630.1-201ENST00000541376 925 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.68□□□□□ -1.5
PDGFAP04085 AC063950.1-201ENST00000552036 308 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 DNAJC8P1-201ENST00000554535 372 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
PDGFAP04085 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFAP04085 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFAP04085 AC100830.2-201ENST00000581636 240 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC5.68□□□□□ -1.5
PDGFAP04085 AC104662.1-201ENST00000604448 511 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 AC006329.2-201ENST00000611491 394 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 AL132822.1-201ENST00000617063 513 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFAP04085 MIR6719-201ENST00000622428 87 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFAP04085 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFAP04085 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFAP04085 AC109446.4-201ENST00000623235 2755 ntBASIC5.68□□□□□ -1.5
PDGFAP04085 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
PDGFAP04085 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFAP04085 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFAP04085 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFAP04085 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.68□□□□□ -1.5
PDGFAP04085 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.68□□□□□ -1.5
PDGFAP04085 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PDGFAP04085 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PDGFAP04085 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFAP04085 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFAP04085 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFAP04085 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFAP04085 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFAP04085 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFAP04085 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFAP04085 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFAP04085 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFAP04085 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFAP04085 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFAP04085 RPL32P3-201ENST00000359025 275 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 Y_RNA.31-201ENST00000362574 102 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 RNU6-1188P-201ENST00000363795 107 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 AC117470.1-201ENST00000381974 330 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 RNU6-339P-201ENST00000384310 107 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 AL391361.1-201ENST00000405580 489 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 AL023284.3-201ENST00000407767 334 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC5.67□□□□□ -1.5
PDGFAP04085 AL035660.1-201ENST00000422041 222 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 ACTR3BP6-201ENST00000422332 1241 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 RPL32P28-201ENST00000443577 397 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFAP04085 YWHAEP1-201ENST00000453697 763 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 snoU109.4-201ENST00000458953 143 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 RPL21P8-201ENST00000465083 535 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 AL136038.1-201ENST00000497246 351 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 RPL23AP55-201ENST00000498163 452 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 RPS27P27-201ENST00000498779 255 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 AC024558.1-201ENST00000505008 528 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 SNORA58-201ENST00000505219 137 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 MTCYBP40-201ENST00000509390 1135 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.67□□□□□ -1.5
PDGFAP04085 AC108078.2-201ENST00000510750 236 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 ATP5LP3-201ENST00000514223 304 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 Y_RNA.720-201ENST00000517166 92 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 DEFB108D-201ENST00000527787 222 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.67□□□□□ -1.5
PDGFAP04085 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFAP04085 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.67□□□□□ -1.5
PDGFAP04085 OR11H5P-201ENST00000554039 926 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 AL008729.2-201ENST00000606393 473 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFAP04085 AC091925.1-201ENST00000623204 462 ntBASIC5.67□□□□□ -1.5
PDGFAP04085 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC5.67□□□□□ -1.5
PDGFAP04085 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
PDGFAP04085 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PDGFAP04085 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms