Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 MIR4278-201ENST00000636094 69 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 AC068620.4-201ENST00000636730 1182 ntBASIC3.81□□□□□ -1.8
CLPTM1O96005 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
CLPTM1O96005 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
CLPTM1O96005 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.81□□□□□ -1.8
CLPTM1O96005 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CLPTM1O96005 AC022031.1-201ENST00000585985 2593 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLPTM1O96005 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLPTM1O96005 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLPTM1O96005 AC016716.1-201ENST00000265882 708 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLPTM1O96005 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.8□□□□□ -1.8
CLPTM1O96005 RNU5D-1-201ENST00000363299 116 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLPTM1O96005 SNORA51.12-201ENST00000384448 134 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.8□□□□□ -1.8
CLPTM1O96005 TAF9BP1-201ENST00000396646 746 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 ATP5F1P3-201ENST00000397213 657 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 RNU2-42P-201ENST00000410697 113 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 AL139095.3-201ENST00000419672 1203 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 RPL18P10-201ENST00000425606 538 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 KCTD9P3-201ENST00000434597 1169 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 SKP1P1-201ENST00000438081 489 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.8□□□□□ -1.8
CLPTM1O96005 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CLPTM1O96005 CBX1P1-201ENST00000440184 427 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 MTND5P2-201ENST00000442927 1142 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
CLPTM1O96005 CFTRP1-201ENST00000456646 183 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 AC004801.2-202ENST00000463559 283 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.8□□□□□ -1.8
CLPTM1O96005 AC053481.1-201ENST00000467217 306 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 SNRPGP3-201ENST00000469405 227 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 AC011276.1-201ENST00000469688 323 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 AC078785.3-201ENST00000476607 425 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLPTM1O96005 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 AC105313.1-201ENST00000509121 353 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 MTCYBP16-201ENST00000509187 1129 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 RNU6-202P-201ENST00000515998 96 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 Y_RNA.688-201ENST00000516565 95 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 RNA5SP135-201ENST00000517019 125 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.8□□□□□ -1.8
CLPTM1O96005 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC3.8□□□□□ -1.8
CLPTM1O96005 HIGD1AP6-201ENST00000521833 279 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
CLPTM1O96005 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.8□□□□□ -1.8
CLPTM1O96005 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.8□□□□□ -1.8
CLPTM1O96005 AP004242.1-201ENST00000533701 349 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.8□□□□□ -1.8
CLPTM1O96005 AC005832.3-201ENST00000537929 631 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 MTCYBP27-201ENST00000555160 670 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 GTF2IP8-201ENST00000560687 584 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 AL132657.2-201ENST00000564417 358 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.8□□□□□ -1.8
CLPTM1O96005 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC3.8□□□□□ -1.8
CLPTM1O96005 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.8□□□□□ -1.8
CLPTM1O96005 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.8□□□□□ -1.8
CLPTM1O96005 BNIP3P26-201ENST00000600827 554 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 TEX41-238ENST00000604253 709 ntTSL 5 BASIC3.8□□□□□ -1.8
CLPTM1O96005 RNA5SP108-201ENST00000605921 117 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 AC105429.2-201ENST00000610567 517 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CLPTM1O96005 MIR378J-201ENST00000611988 109 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 AL592295.2-201ENST00000612578 206 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 RNVU1-4-201ENST00000612985 164 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 MIR6758-201ENST00000620653 63 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 MIR3974-201ENST00000637126 96 ntBASIC3.8□□□□□ -1.8
CLPTM1O96005 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLPTM1O96005 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLPTM1O96005 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.8□□□□□ -1.8
CLPTM1O96005 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
CLPTM1O96005 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLPTM1O96005 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CLPTM1O96005 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLPTM1O96005 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CLPTM1O96005 MIR331-201ENST00000362302 94 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 RNU6-582P-201ENST00000362989 107 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 RNA5SP175-201ENST00000364275 119 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 MIR3065-201ENST00000390137 79 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 AL133264.1-201ENST00000407157 562 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 AL139098.1-201ENST00000407291 389 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 RNU2-65P-201ENST00000410162 185 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.79□□□□□ -1.8
CLPTM1O96005 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.79□□□□□ -1.8
CLPTM1O96005 AL592293.2-201ENST00000422292 996 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.79□□□□□ -1.8
CLPTM1O96005 AC011998.1-201ENST00000433403 117 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.79□□□□□ -1.8
CLPTM1O96005 ACTR3P2-201ENST00000439585 1257 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 PHBP16-201ENST00000446318 950 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 RPL23AP15-201ENST00000450202 459 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 PPIAP3-201ENST00000450588 505 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 DHFRP3-201ENST00000455595 559 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC3.79□□□□□ -1.8
CLPTM1O96005 RNU7-125P-201ENST00000458760 62 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 RPL7L1P8-201ENST00000469911 741 ntBASIC3.79□□□□□ -1.8
CLPTM1O96005 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms